Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU408403 |
| length | 602 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G297013 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NW_019172828.1 |
| NCBI id | APWO02000046.1 |
| chromosome length | 5964967 |
| location | 2692022 ~ 2692623 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0030154 | cell differentiation | biological_process |
| GO:0030182 | neuron differentiation | biological_process |
| GO:0021872 | forebrain generation of neurons | biological_process |
| GO:0021879 | forebrain neuron differentiation | biological_process |
| GO:0021884 | forebrain neuron development | biological_process |
| GO:0048869 | cellular developmental process | biological_process |
| GO:0007399 | nervous system development | biological_process |
| GO:0030900 | forebrain development | biological_process |
| GO:0022008 | neurogenesis | biological_process |
| GO:0048699 | generation of neurons | biological_process |
| id | description |
|---|---|
| ko04360 | Axon guidance |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU408427 | lncRNA | upstream | 14062 | 2675575 ~ 2677960 (+) | True | G297023 |
| TU408428 | lncRNA | upstream | 14062 | 2675575 ~ 2677960 (+) | False | G297023 |
| TU408421 | lncRNA | upstream | 18076 | 2671700 ~ 2673946 (+) | True | G297022 |
| TU408415 | lncRNA | upstream | 22160 | 2668672 ~ 2669862 (+) | True | G297021 |
| TU408416 | lncRNA | upstream | 22160 | 2668672 ~ 2669862 (+) | False | G297021 |
| TU408489 | lncRNA | downstream | 6087 | 2698710 ~ 2698926 (+) | True | G297040 |
| TU408491 | lncRNA | downstream | 22653 | 2715276 ~ 2777154 (+) | True | G297042 |
| TU408492 | lncRNA | downstream | 27284 | 2719907 ~ 2723548 (+) | True | G297043 |
| TU408505 | lncRNA | downstream | 128500 | 2821123 ~ 2821452 (+) | True | G297056 |
| TU408508 | lncRNA | downstream | 172755 | 2865378 ~ 2865626 (+) | True | G297059 |
| XM_022665111.1 | mRNA | upstream | 3232 | 2549150 ~ 2688790 (+) | True | LOC111191060 |
| XM_022665066.1 | mRNA | upstream | 570528 | 1844980 ~ 2121494 (+) | True | LOC103028117 |
| XM_022664983.1 | mRNA | upstream | 1341102 | 1334340 ~ 1350920 (+) | False | LOC103044572 |
| XM_022664982.1 | mRNA | upstream | 1341102 | 1334344 ~ 1350920 (+) | True | LOC103044572 |
| XM_007239306.3 | mRNA | upstream | 1403529 | 1287516 ~ 1288493 (+) | False | LOC103044283 |
| XM_022665042.1 | mRNA | downstream | 76041 | 2768664 ~ 2925185 (+) | True | LOC111191042 |
| XM_022665043.1 | mRNA | downstream | 76041 | 2768664 ~ 2925185 (+) | False | LOC111191042 |
| XM_022664959.1 | mRNA | downstream | 377014 | 3069637 ~ 3148603 (+) | True | LOC111191028 |
| XM_022665033.1 | mRNA | downstream | 472426 | 3165049 ~ 3216189 (+) | True | LOC103026062 |
| XM_022665037.1 | mRNA | downstream | 472426 | 3165049 ~ 3216189 (+) | False | LOC103026062 |
| XR_002649344.1 | other | upstream | 13745 | 2674748 ~ 2678277 (+) | True | LOC111191061 |
| TU408143 | other | upstream | 1330087 | 1359112 ~ 1361935 (+) | True | G296790 |
| TU407986 | other | upstream | 1491234 | 1191763 ~ 1200788 (+) | True | G296679 |
| TU407749 | other | upstream | 2651131 | 36851 ~ 40891 (+) | False | LOC103026352 |
| TU408827 | other | downstream | 857721 | 3550344 ~ 3559451 (+) | False | LOC103030733 |
| XR_002649321.1 | other | downstream | 1560393 | 4253016 ~ 4295186 (+) | False | LOC103041102 |
| XR_002649326.1 | other | downstream | 1727374 | 4419997 ~ 4434071 (+) | False | znf653 |
| TU409249 | other | downstream | 1958020 | 4650643 ~ 4675519 (+) | False | LOC111191039 |
| XR_002649334.1 | other | downstream | 3009931 | 5702554 ~ 5711874 (+) | True | LOC103033323 |
