Item | Value |
---|---|
RNA id | TU408407 |
length | 706 |
lncRNA type | intronic |
GC content | 0.37 |
exon number | 2 |
gene id | G297016 |
representative | False |
Item | Value |
---|---|
chromosome id | NW_019172828.1 |
NCBI id | APWO02000046.1 |
chromosome length | 5964967 |
location | 2649415 ~ 2651959 (+) |
genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
species | mexican tetra (Astyanax mexicanus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU408394 | lncRNA | upstream | 144561 | 2504459 ~ 2504854 (+) | True | G297005 |
TU408392 | lncRNA | upstream | 153614 | 2495089 ~ 2495801 (+) | True | G297003 |
TU408386 | lncRNA | upstream | 161771 | 2486742 ~ 2487644 (+) | True | G296999 |
TU408376 | lncRNA | upstream | 377212 | 2271937 ~ 2272203 (+) | True | G296989 |
TU408373 | lncRNA | upstream | 420683 | 2228293 ~ 2228732 (+) | True | G296986 |
TU408411 | lncRNA | downstream | 2813 | 2654772 ~ 2659221 (+) | True | G297018 |
TU408415 | lncRNA | downstream | 16713 | 2668672 ~ 2669862 (+) | True | G297021 |
TU408416 | lncRNA | downstream | 16713 | 2668672 ~ 2669862 (+) | False | G297021 |
TU408421 | lncRNA | downstream | 19741 | 2671700 ~ 2673946 (+) | True | G297022 |
TU408427 | lncRNA | downstream | 23616 | 2675575 ~ 2677960 (+) | True | G297023 |
XM_022665066.1 | mRNA | upstream | 527921 | 1844980 ~ 2121494 (+) | True | LOC103028117 |
XM_022664983.1 | mRNA | upstream | 1298495 | 1334340 ~ 1350920 (+) | False | LOC103044572 |
XM_022664982.1 | mRNA | upstream | 1298495 | 1334344 ~ 1350920 (+) | True | LOC103044572 |
XM_007239306.3 | mRNA | upstream | 1360922 | 1287516 ~ 1288493 (+) | False | LOC103044283 |
XM_022665048.1 | mRNA | upstream | 1572860 | 1036346 ~ 1076555 (+) | True | rnd2 |
XM_022665042.1 | mRNA | downstream | 116705 | 2768664 ~ 2925185 (+) | True | LOC111191042 |
XM_022665043.1 | mRNA | downstream | 116705 | 2768664 ~ 2925185 (+) | False | LOC111191042 |
XM_022664959.1 | mRNA | downstream | 417678 | 3069637 ~ 3148603 (+) | True | LOC111191028 |
XM_022665033.1 | mRNA | downstream | 513090 | 3165049 ~ 3216189 (+) | True | LOC103026062 |
XM_022665037.1 | mRNA | downstream | 513090 | 3165049 ~ 3216189 (+) | False | LOC103026062 |
TU408143 | other | upstream | 1287480 | 1359112 ~ 1361935 (+) | True | G296790 |
TU407986 | other | upstream | 1448627 | 1191763 ~ 1200788 (+) | True | G296679 |
TU407749 | other | upstream | 2608524 | 36851 ~ 40891 (+) | False | LOC103026352 |
XR_002649344.1 | other | downstream | 22789 | 2674748 ~ 2678277 (+) | True | LOC111191061 |
TU408827 | other | downstream | 898385 | 3550344 ~ 3559451 (+) | False | LOC103030733 |
XR_002649321.1 | other | downstream | 1601057 | 4253016 ~ 4295186 (+) | False | LOC103041102 |
XR_002649326.1 | other | downstream | 1768038 | 4419997 ~ 4434071 (+) | False | znf653 |
TU409249 | other | downstream | 1998684 | 4650643 ~ 4675519 (+) | False | LOC111191039 |