Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU408865 |
| length | 765 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 2 |
| gene id | G297318 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NW_019172828.1 |
| NCBI id | APWO02000046.1 |
| chromosome length | 5964967 |
| location | 3693698 ~ 3697530 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU408849 | lncRNA | upstream | 29119 | 3661243 ~ 3664579 (+) | True | G297303 |
| TU408833 | lncRNA | upstream | 53084 | 3566422 ~ 3640614 (+) | False | LOC103030733 |
| TU408832 | lncRNA | upstream | 109345 | 3566875 ~ 3584353 (+) | False | LOC103030733 |
| TU408751 | lncRNA | upstream | 281613 | 3411256 ~ 3412085 (+) | True | G297218 |
| TU408750 | lncRNA | upstream | 282886 | 3348742 ~ 3410812 (+) | True | G297217 |
| TU408943 | lncRNA | downstream | 80376 | 3777906 ~ 3783928 (+) | True | G297369 |
| TU408936 | lncRNA | downstream | 129238 | 3826768 ~ 3830199 (+) | True | G297367 |
| XR_002649338.1 | lncRNA | downstream | 168410 | 3865940 ~ 3886107 (+) | True | LOC111191051 |
| XR_002649339.1 | lncRNA | downstream | 176088 | 3873618 ~ 3886107 (+) | False | LOC111191051 |
| TU408956 | lncRNA | downstream | 189169 | 3886699 ~ 3888763 (+) | True | G297377 |
| XM_022665062.1 | mRNA | upstream | 42363 | 3645713 ~ 3651335 (+) | True | LOC111191046 |
| XM_022664990.1 | mRNA | upstream | 72871 | 3596527 ~ 3620827 (+) | True | farsa |
| XM_007241957.3 | mRNA | upstream | 98327 | 3574725 ~ 3595371 (+) | True | ilf3 |
| XM_007241959.3 | mRNA | upstream | 102295 | 3574633 ~ 3591403 (+) | False | ilf3 |
| XM_022664968.1 | mRNA | downstream | 7274 | 3704804 ~ 3761747 (+) | True | LOC103025262 |
| XM_022664967.1 | mRNA | downstream | 19559 | 3717089 ~ 3761747 (+) | False | LOC103025262 |
| XM_022664969.1 | mRNA | downstream | 19560 | 3717090 ~ 3766487 (+) | False | LOC103025262 |
| XM_022664970.1 | mRNA | downstream | 78993 | 3776523 ~ 3825640 (+) | True | LOC103046751 |
| XM_007238231.3 | mRNA | downstream | 382619 | 4080149 ~ 4159462 (+) | False | LOC103038737 |
| TU408827 | other | upstream | 134247 | 3550344 ~ 3559451 (+) | False | LOC103030733 |
| XR_002649344.1 | other | upstream | 1015421 | 2674748 ~ 2678277 (+) | True | LOC111191061 |
| TU408143 | other | upstream | 2331763 | 1359112 ~ 1361935 (+) | True | G296790 |
| TU407986 | other | upstream | 2492910 | 1191763 ~ 1200788 (+) | True | G296679 |
| TU407749 | other | upstream | 3652807 | 36851 ~ 40891 (+) | False | LOC103026352 |
| XR_002649321.1 | other | downstream | 555486 | 4253016 ~ 4295186 (+) | False | LOC103041102 |
| XR_002649326.1 | other | downstream | 722467 | 4419997 ~ 4434071 (+) | False | znf653 |
| TU409249 | other | downstream | 953113 | 4650643 ~ 4675519 (+) | False | LOC111191039 |
| XR_002649334.1 | other | downstream | 2005024 | 5702554 ~ 5711874 (+) | True | LOC103033323 |
