Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_002649328.1 |
| length | 856 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 3 |
| gene id | LOC111191040 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NW_019172828.1 |
| NCBI id | APWO02000046.1 |
| chromosome length | 5964967 |
| location | 4802302 ~ 4806391 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU409279 | lncRNA | upstream | 9 | 4795994 ~ 4802293 (+) | False | G297580 |
| TU409280 | lncRNA | upstream | 9 | 4795994 ~ 4802293 (+) | True | G297580 |
| TU409261 | lncRNA | upstream | 14226 | 4717779 ~ 4788076 (+) | True | G297571 |
| TU409250 | lncRNA | upstream | 143653 | 4654334 ~ 4658649 (+) | True | G297561 |
| TU409304 | lncRNA | downstream | 234709 | 5038775 ~ 5039047 (+) | True | G297604 |
| TU409315 | lncRNA | downstream | 258250 | 5062316 ~ 5062662 (+) | True | G297614 |
| TU409330 | lncRNA | downstream | 308314 | 5112380 ~ 5116676 (+) | True | LOC111191036 |
| XR_002649324.1 | lncRNA | downstream | 308434 | 5112500 ~ 5116810 (+) | False | LOC111191036 |
| XR_002649325.1 | lncRNA | downstream | 308434 | 5112500 ~ 5116810 (+) | False | LOC111191036 |
| XM_007237548.3 | mRNA | upstream | 12619 | 4773643 ~ 4789683 (+) | True | nme4 |
| XM_022665015.1 | mRNA | upstream | 12619 | 4777511 ~ 4789683 (+) | False | nme4 |
| XM_022665110.1 | mRNA | upstream | 31547 | 4734668 ~ 4770755 (+) | True | xpo6 |
| XM_022665071.1 | mRNA | upstream | 69740 | 4726687 ~ 4732562 (+) | True | LOC103025123 |
| XM_022665002.1 | mRNA | upstream | 90563 | 4709464 ~ 4711739 (+) | True | LOC111191037 |
| XM_007237547.3 | mRNA | downstream | 267338 | 5071404 ~ 5073183 (+) | True | gadd45gip1 |
| XM_022664965.1 | mRNA | downstream | 313514 | 5117580 ~ 5128255 (+) | False | recql5 |
| XM_022664964.1 | mRNA | downstream | 313519 | 5117585 ~ 5168515 (+) | True | recql5 |
| XM_022664989.1 | mRNA | downstream | 424978 | 5229044 ~ 5270102 (+) | True | xylt2 |
| XM_022664960.1 | mRNA | downstream | 474096 | 5278162 ~ 5344518 (+) | False | rab37 |
| TU409249 | other | upstream | 126783 | 4650643 ~ 4675519 (+) | False | LOC111191039 |
| XR_002649326.1 | other | upstream | 368231 | 4419997 ~ 4434071 (+) | False | znf653 |
| XR_002649321.1 | other | upstream | 507116 | 4253016 ~ 4295186 (+) | False | LOC103041102 |
| TU408827 | other | upstream | 1242851 | 3550344 ~ 3559451 (+) | False | LOC103030733 |
| XR_002649344.1 | other | upstream | 2124025 | 2674748 ~ 2678277 (+) | True | LOC111191061 |
| XR_002649334.1 | other | downstream | 898488 | 5702554 ~ 5711874 (+) | True | LOC103033323 |
