Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU409342 |
| length | 712 |
| lncRNA type | inter_gene |
| GC content | 0.33 |
| exon number | 2 |
| gene id | G297634 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NW_019172828.1 |
| NCBI id | APWO02000046.1 |
| chromosome length | 5964967 |
| location | 5169353 ~ 5202662 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_002649324.1 | lncRNA | upstream | 52543 | 5112500 ~ 5116810 (+) | False | LOC111191036 |
| XR_002649325.1 | lncRNA | upstream | 52543 | 5112500 ~ 5116810 (+) | False | LOC111191036 |
| TU409330 | lncRNA | upstream | 52677 | 5112380 ~ 5116676 (+) | True | LOC111191036 |
| TU409315 | lncRNA | upstream | 106691 | 5062316 ~ 5062662 (+) | True | G297614 |
| TU409304 | lncRNA | upstream | 130306 | 5038775 ~ 5039047 (+) | True | G297604 |
| TU409370 | lncRNA | downstream | 158744 | 5361406 ~ 5403107 (+) | True | G297656 |
| TU409381 | lncRNA | downstream | 188658 | 5391320 ~ 5458441 (+) | True | G297658 |
| TU409386 | lncRNA | downstream | 193062 | 5395724 ~ 5398831 (+) | True | G297660 |
| TU409374 | lncRNA | downstream | 253556 | 5456218 ~ 5458441 (+) | False | G297658 |
| TU409377 | lncRNA | downstream | 254821 | 5457483 ~ 5458441 (+) | False | G297658 |
| XM_022664964.1 | mRNA | upstream | 838 | 5117585 ~ 5168515 (+) | True | recql5 |
| XM_022664965.1 | mRNA | upstream | 41098 | 5117580 ~ 5128255 (+) | False | recql5 |
| XM_007237547.3 | mRNA | upstream | 96170 | 5071404 ~ 5073183 (+) | True | gadd45gip1 |
| XM_007237548.3 | mRNA | upstream | 379670 | 4773643 ~ 4789683 (+) | True | nme4 |
| XM_022665015.1 | mRNA | upstream | 379670 | 4777511 ~ 4789683 (+) | False | nme4 |
| XM_022664989.1 | mRNA | downstream | 26382 | 5229044 ~ 5270102 (+) | True | xylt2 |
| XM_022664960.1 | mRNA | downstream | 75500 | 5278162 ~ 5344518 (+) | False | rab37 |
| XM_022664961.1 | mRNA | downstream | 103018 | 5305680 ~ 5344518 (+) | True | rab37 |
| XM_022665001.1 | mRNA | downstream | 145713 | 5348375 ~ 5356879 (+) | True | LOC103026631 |
| XM_022665081.1 | mRNA | downstream | 212535 | 5415197 ~ 5451392 (+) | True | glis2 |
| TU409249 | other | upstream | 493834 | 4650643 ~ 4675519 (+) | False | LOC111191039 |
| XR_002649326.1 | other | upstream | 735282 | 4419997 ~ 4434071 (+) | False | znf653 |
| XR_002649321.1 | other | upstream | 874167 | 4253016 ~ 4295186 (+) | False | LOC103041102 |
| TU408827 | other | upstream | 1609902 | 3550344 ~ 3559451 (+) | False | LOC103030733 |
| XR_002649344.1 | other | upstream | 2491076 | 2674748 ~ 2678277 (+) | True | LOC111191061 |
| XR_002649334.1 | other | downstream | 499892 | 5702554 ~ 5711874 (+) | True | LOC103033323 |
