Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU409377 |
| length | 820 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 2 |
| gene id | G297658 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NW_019172828.1 |
| NCBI id | APWO02000046.1 |
| chromosome length | 5964967 |
| location | 5391320 ~ 5458441 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU409370 | lncRNA | upstream | 54376 | 5361406 ~ 5403107 (+) | True | G297656 |
| TU409386 | lncRNA | upstream | 58652 | 5395724 ~ 5398831 (+) | True | G297660 |
| TU409342 | lncRNA | upstream | 254821 | 5169353 ~ 5202662 (+) | False | G297634 |
| TU409348 | lncRNA | upstream | 278745 | 5178355 ~ 5178738 (+) | True | G297638 |
| TU409343 | lncRNA | upstream | 284703 | 5169428 ~ 5172780 (+) | True | G297634 |
| TU409372 | lncRNA | downstream | 108 | 5458549 ~ 5461512 (+) | True | G297657 |
| TU409373 | lncRNA | downstream | 108 | 5458549 ~ 5461512 (+) | False | G297657 |
| TU409415 | lncRNA | downstream | 4264 | 5462705 ~ 5466991 (+) | True | G297679 |
| TU409416 | lncRNA | downstream | 4264 | 5462705 ~ 5464657 (+) | False | G297679 |
| XR_002649341.1 | lncRNA | downstream | 9482 | 5467923 ~ 5481340 (+) | True | LOC111191054 |
| XM_022665081.1 | mRNA | upstream | 6091 | 5415197 ~ 5451392 (+) | True | glis2 |
| XM_022665001.1 | mRNA | upstream | 100604 | 5348375 ~ 5356879 (+) | True | LOC103026631 |
| XM_022664960.1 | mRNA | upstream | 112965 | 5278162 ~ 5344518 (+) | False | rab37 |
| XM_022664961.1 | mRNA | upstream | 112965 | 5305680 ~ 5344518 (+) | True | rab37 |
| XM_022664989.1 | mRNA | upstream | 187381 | 5229044 ~ 5270102 (+) | True | xylt2 |
| XM_022665083.1 | mRNA | downstream | 198325 | 5656766 ~ 5666429 (+) | True | dnaja3 |
| XM_022665056.1 | mRNA | downstream | 244071 | 5702512 ~ 5711874 (+) | False | LOC103033323 |
| XM_022665055.1 | mRNA | downstream | 244113 | 5702554 ~ 5711874 (+) | False | LOC103033323 |
| XM_007232197.1 | mRNA | downstream | 260628 | 5719069 ~ 5719464 (+) | True | LOC103033642 |
| XM_007232186.3 | mRNA | downstream | 285347 | 5743788 ~ 5761476 (+) | True | ccnf |
| TU409249 | other | upstream | 781964 | 4650643 ~ 4675519 (+) | False | LOC111191039 |
| XR_002649326.1 | other | upstream | 1023412 | 4419997 ~ 4434071 (+) | False | znf653 |
| XR_002649321.1 | other | upstream | 1162297 | 4253016 ~ 4295186 (+) | False | LOC103041102 |
| TU408827 | other | upstream | 1898032 | 3550344 ~ 3559451 (+) | False | LOC103030733 |
| XR_002649344.1 | other | upstream | 2779206 | 2674748 ~ 2678277 (+) | True | LOC111191061 |
| XR_002649334.1 | other | downstream | 244113 | 5702554 ~ 5711874 (+) | True | LOC103033323 |
