Gene
RNA
| Item | Value |
|---|---|
| RNA id | trnac-gca_40 |
| length | 72 |
| RNA type | tRNA |
| GC content | 0.54 |
| exon number | 1 |
| gene id | trnac-gca_40 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NW_019172828.1 |
| NCBI id | APWO02000046.1 |
| chromosome length | 5964967 |
| location | 2011407 ~ 2011478 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU408344 | lncRNA | downstream | 33317 | 1976224 ~ 1978090 (-) | True | G296960 |
| XR_454067.3 | lncRNA | downstream | 102002 | 1897876 ~ 1909405 (-) | True | LOC103031477 |
| TU408261 | lncRNA | downstream | 198328 | 1775217 ~ 1813079 (-) | True | G296884 |
| TU408264 | lncRNA | downstream | 215637 | 1792519 ~ 1795770 (-) | True | G296887 |
| TU408265 | lncRNA | downstream | 215637 | 1792519 ~ 1795770 (-) | False | G296887 |
| TU408352 | lncRNA | upstream | 10299 | 2021777 ~ 2022157 (-) | True | G296967 |
| TU408356 | lncRNA | upstream | 110943 | 2122421 ~ 2134425 (-) | True | G296970 |
| TU408359 | lncRNA | upstream | 127235 | 2138713 ~ 2138920 (-) | True | G296972 |
| TU408361 | lncRNA | upstream | 140440 | 2151918 ~ 2152147 (-) | True | G296974 |
| TU408365 | lncRNA | upstream | 188701 | 2200179 ~ 2200390 (-) | True | G296978 |
| XM_022665064.1 | mRNA | downstream | 153585 | 1845913 ~ 1857822 (-) | False | LOC111191047 |
| XM_022665063.1 | mRNA | downstream | 153585 | 1845913 ~ 1857822 (-) | False | LOC111191047 |
| XM_022665065.1 | mRNA | downstream | 161558 | 1845913 ~ 1849849 (-) | True | LOC111191047 |
| XM_022665087.1 | mRNA | downstream | 450007 | 1553406 ~ 1561400 (-) | True | LOC111191055 |
| XM_022665070.1 | mRNA | downstream | 465470 | 1497029 ~ 1545937 (-) | True | LOC103045206 |
| XM_022664972.1 | mRNA | upstream | 265888 | 2277366 ~ 2281361 (-) | True | LOC111191030 |
| XM_022665077.1 | mRNA | upstream | 478359 | 2489837 ~ 2493775 (-) | True | mfsd6l |
| XM_022665102.1 | mRNA | upstream | 485737 | 2497215 ~ 2531502 (-) | True | LOC103037146 |
| XM_022664973.1 | mRNA | upstream | 932372 | 2943850 ~ 2945114 (-) | True | LOC111191031 |
| XM_022665109.1 | mRNA | upstream | 1034752 | 3046230 ~ 3060717 (-) | True | LOC103026382 |
| TU408330 | other | downstream | 164646 | 1845913 ~ 1846761 (-) | False | LOC111191047 |
| XR_002649323.1 | other | downstream | 622699 | 1373381 ~ 1388708 (-) | False | LOC107197178 |
| trnas-gcu_8 | other | upstream | 249 | 2011727 ~ 2011798 (-) | True | trnas-gcu_8 |
| trnay-gua_55 | other | upstream | 462 | 2011940 ~ 2012011 (-) | True | trnay-gua_55 |
| trnat-cgu_5 | other | upstream | 269501 | 2280979 ~ 2281051 (-) | True | trnat-cgu_5 |
| trnar-ucg_44 | other | upstream | 269662 | 2281140 ~ 2281212 (-) | True | trnar-ucg_44 |
| trnac-aca_6 | other | upstream | 270026 | 2281504 ~ 2281576 (-) | True | trnac-aca_6 |
