Gene
RNA
| Item | Value |
|---|---|
| RNA id | trnat-cgu_5 |
| length | 73 |
| RNA type | tRNA |
| GC content | 0.47 |
| exon number | 1 |
| gene id | trnat-cgu_5 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NW_019172828.1 |
| NCBI id | APWO02000046.1 |
| chromosome length | 5964967 |
| location | 2280979 ~ 2281051 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU408374 | lncRNA | downstream | 52775 | 2227646 ~ 2228204 (-) | True | G296987 |
| TU408367 | lncRNA | downstream | 71100 | 2209670 ~ 2209879 (-) | True | G296980 |
| TU408365 | lncRNA | downstream | 80589 | 2200179 ~ 2200390 (-) | True | G296978 |
| TU408361 | lncRNA | downstream | 128832 | 2151918 ~ 2152147 (-) | True | G296974 |
| TU408359 | lncRNA | downstream | 142059 | 2138713 ~ 2138920 (-) | True | G296972 |
| TU408385 | lncRNA | upstream | 201506 | 2482557 ~ 2482860 (-) | True | G296998 |
| TU408396 | lncRNA | upstream | 214066 | 2495117 ~ 2495708 (-) | True | G297007 |
| TU408398 | lncRNA | upstream | 224785 | 2505836 ~ 2506158 (-) | True | G297009 |
| TU408449 | lncRNA | upstream | 368361 | 2649412 ~ 2658126 (-) | True | G297032 |
| TU408452 | lncRNA | upstream | 368361 | 2649412 ~ 2658126 (-) | False | G297032 |
| XM_022665064.1 | mRNA | downstream | 423157 | 1845913 ~ 1857822 (-) | False | LOC111191047 |
| XM_022665063.1 | mRNA | downstream | 423157 | 1845913 ~ 1857822 (-) | False | LOC111191047 |
| XM_022665065.1 | mRNA | downstream | 431130 | 1845913 ~ 1849849 (-) | True | LOC111191047 |
| XM_022665087.1 | mRNA | downstream | 719579 | 1553406 ~ 1561400 (-) | True | LOC111191055 |
| XM_022665070.1 | mRNA | downstream | 735042 | 1497029 ~ 1545937 (-) | True | LOC103045206 |
| XM_022665077.1 | mRNA | upstream | 208786 | 2489837 ~ 2493775 (-) | True | mfsd6l |
| XM_022665102.1 | mRNA | upstream | 216164 | 2497215 ~ 2531502 (-) | True | LOC103037146 |
| XM_022664973.1 | mRNA | upstream | 662799 | 2943850 ~ 2945114 (-) | True | LOC111191031 |
| XM_022665109.1 | mRNA | upstream | 765179 | 3046230 ~ 3060717 (-) | True | LOC103026382 |
| XM_022664992.1 | mRNA | upstream | 1373326 | 3654377 ~ 3675494 (-) | True | gcdh |
| trnay-gua_55 | other | downstream | 268968 | 2011940 ~ 2012011 (-) | True | trnay-gua_55 |
| trnas-gcu_8 | other | downstream | 269181 | 2011727 ~ 2011798 (-) | True | trnas-gcu_8 |
| trnac-gca_40 | other | downstream | 269501 | 2011407 ~ 2011478 (-) | True | trnac-gca_40 |
| TU408330 | other | downstream | 434218 | 1845913 ~ 1846761 (-) | False | LOC111191047 |
| XR_002649323.1 | other | downstream | 892271 | 1373381 ~ 1388708 (-) | False | LOC107197178 |
| trnar-ucg_44 | other | upstream | 89 | 2281140 ~ 2281212 (-) | True | trnar-ucg_44 |
| trnac-aca_6 | other | upstream | 453 | 2281504 ~ 2281576 (-) | True | trnac-aca_6 |
| trnac-aca_7 | other | upstream | 555 | 2281606 ~ 2281678 (-) | True | trnac-aca_7 |
| trnac-aca_8 | other | upstream | 657 | 2281708 ~ 2281780 (-) | True | trnac-aca_8 |
| trnac-aca_9 | other | upstream | 759 | 2281810 ~ 2281882 (-) | True | trnac-aca_9 |
