RNA id: trnam-cau_92


Basic Information

Item Value
RNA id trnam-cau_92
length 72
RNA type tRNA
GC content 0.60
exon number 1
gene id trnam-cau_92
representative True

Chromosome Information

Item Value
chromosome id NW_019172836.1
NCBI id APWO02000054.1
chromosome length 895725
location 893962 ~ 894033 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

AGCAGAGTGGCGCAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGTCGATGGATCGAAACCATCCTCTGCTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU417863 lncRNA upstream 80240 812879 ~ 813722 (+) True G303421
TU417862 lncRNA upstream 80683 812879 ~ 813279 (+) False G303421
TU417845 lncRNA upstream 84200 807103 ~ 809762 (+) False G303413
XM_022665569.1 mRNA upstream 345791 432587 ~ 548171 (+) True syk
XM_022665565.1 mRNA upstream 489211 402467 ~ 404751 (+) True LOC103031748
XM_007255323.3 mRNA upstream 495116 395959 ~ 398846 (+) True LOC103025635
XM_007255319.3 mRNA upstream 504692 385503 ~ 389270 (+) True LOC103024567
XM_022665573.1 mRNA upstream 510083 382055 ~ 383879 (+) True LOC103024265
trnam-cau_91 other upstream 131 893760 ~ 893831 (+) True trnam-cau_91
trnar-ccu_63 other upstream 425 893465 ~ 893537 (+) True trnar-ccu_63
XR_002649404.1 other upstream 87598 806109 ~ 806364 (+) False LOC111191247
TU417689 other upstream 510089 378749 ~ 383873 (+) False G303307
TU417690 other upstream 521263 365993 ~ 372699 (+) True G303307
trnam-cau_93 other downstream 144 894177 ~ 894248 (+) True trnam-cau_93