RNA id: XM_007235345.3


Basic Information

Item Value
RNA id XM_007235345.3
length 1365
RNA type mRNA
GC content 0.51
exon number 4
gene id LOC103044774
representative True

Chromosome Information

Item Value
chromosome id NW_019172846.1
NCBI id APWO02000057.1
chromosome length 1249306
location 92506 ~ 101029 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

ggggcttgcTGCGGTACAGGTGGAGATGAGGGAGTGCAGCTGGAGGAGTCTTCTGTTACCAGGAAGTGGGTCgtgttatttatatttcagCACAGTGGAGGAGTGAGGTTGAAACAGGACACCTGCACAGTATCCCACAATCCTCTGCACACCGCTCACCTGAGGATGGACGGAGGAGGCCGGGCGGCAGCACAGCGGCatcacagcagcagcacagccgGGGCTCTGagggcagagtgagatTCACTGAGTAAACCTGGTGGATCCTGCATTCAGTGTTTAGCTCCACTCCAGGGGCGCTGTGATGAAGATCCATAAGAAGATTCTGACACACTACCTGTCCTGTACTTCACCTGTTGATAAAGAGGGTTATCTGTACAAAAAGAGAGAGCGGAACACCTCGTACCTGCGTCGCTGGTTCGTACTGAAGGGGAACCTGCTGTTCTATCAGGAGCGTCCTGCTGACCGCAGTCTCCTGGGGGTCATCGTTCTGGAGGGCTGCGTGGTGCAGGCCGGAGATCCAGACGGactgttctctttctctttagtgTTCACTGGACCAGGCCTGAGAACCTACAGACTCGCTGCAGAAGACCACCTGACCCAGGAGAGCTGGATCAGCGCCTTACTGACCGCCAGCCACATCTACATCTCCCTGCTGGTTAAAGATCTAGAGAGACTTTACAAAGAAGCTAAGCAGGAGAAAAGTCTCGCTGGCTCCTCCCCCTCCTCAGTGACTGGGTCATGCGTTAGGGCCTCCAGCACTGCCATGGCCTTCAACACGGGCCCACCTTTCTTCTTCCAGAGACCCCCAGCGTTACCCAGAGAGAAGAGAAGCTACAGCGCCAGTTCTGCCCTGCAGAGTCCAGCCGTCCACACCCCCGTCAGAACCACCAACAAGAGATCCCCCAAACTCTGGCCCAAGAGGAACGCCCACGTCACGCCTCTCAACGGCCCCGCCCCTCCACACGGGGAGTGGCCTTTAATGTGCTTTGATCCACTGGAGGAATTCAGTAAACTGCATGAGTATTATGGAAATGAAGTCAAGCAgctgagagctgattggctgaagagTAAACGGTTGGAGGAGGGGCATGTTGAAGAGGATCTGATCGATTTAggataaacatttaatataaattatttaaaatctgcTGCCTTTTTTACCTCACTTTTCTAATTACTCCAAATCCAGTTCCTCAtccaagacatgtttggtgtctgaTGTTTGTGCCTGAGCTACAAtgataatgtagctaacaagtaatggaatCTTATGGCCACCAATTAGCGTGCTGCTACAGCATGCCTAAATTATCTCGCAGACTTTTCTCAAACCAtgttctaataaaaataatatctctA

Function

GO: NA

KEGG:

id description
K23791 PHETA; sesquipedalian

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU422528 lncRNA downstream 10389 32740 ~ 82117 (-) True G306834
TU422678 lncRNA upstream 16035 117064 ~ 117820 (-) True G306934
TU422689 lncRNA upstream 103024 204053 ~ 204448 (-) True G306943
TU422697 lncRNA upstream 126504 227533 ~ 232773 (-) True G306951
TU422718 lncRNA upstream 185869 286898 ~ 287535 (-) True G306968
TU422748 lncRNA upstream 321914 422943 ~ 424133 (-) True G306995
XM_007235349.3 mRNA downstream 15754 69819 ~ 76752 (-) True LOC103045793
XM_007235350.2 mRNA downstream 26943 57616 ~ 65563 (-) True cd2bp2
XM_022665896.1 mRNA downstream 39193 36305 ~ 53313 (-) True LOC111191303
XM_022665897.1 mRNA downstream 39743 36305 ~ 52763 (-) False LOC111191303
XM_022665888.1 mRNA downstream 69079 8769 ~ 23427 (-) False cunh16orf58
XM_022665891.1 mRNA upstream 3716 104745 ~ 121428 (-) True tbc1d10b
XM_007235348.3 mRNA upstream 7010 108039 ~ 133593 (-) False tbc1d10b
XM_022665900.1 mRNA upstream 39141 140170 ~ 151251 (-) True LOC111191304
XM_022665898.1 mRNA upstream 51769 152798 ~ 163938 (-) True LOC103044465
XM_022665899.1 mRNA upstream 59363 160392 ~ 163938 (-) False LOC103044465

Expression Profile