RNA id: XM_007235349.3


Basic Information

Item Value
RNA id XM_007235349.3
length 1305
RNA type mRNA
GC content 0.50
exon number 7
gene id LOC103045793
representative True

Chromosome Information

Item Value
chromosome id NW_019172846.1
NCBI id APWO02000057.1
chromosome length 1249306
location 69819 ~ 76752 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

TGGCGGGTGGGAGGTATATAAGCCCCCAGTGAAGAAACCAAACTGCGGCTTCACACACTCTTCTCTTCTTTGAGGCTCTTACACTTCACACATACCGTCTCATAATGGCACCCAAGAAGGCCAAGAGGAgggcaggaggaggagagggtTCCTCCAACGTCTTCTCCATGTTCGAGCAGAGCCAGATCCAGGAGTACAAAGAGGCTTTCACAATCATTGACCAGAACAGAGACGGTATCATCAGCAAGGACGACCTGAGGGACGTATTGGCCTCAATGGGTCAGCTGAATGTGAAGAATGAGGAGCTGGAGGCCATGGTCAAGGAGGCTAGCGGCCCAATCAACTTCACCGTCTTCCTCACCATGTTCGGAGAGAAGCTGAAGGGTGCTGATCCCGAGGACGTCATCCTGACCGCTTTCAAGGTGCTGGACCCAGAGGGAACAGGCAGCATTAAGAAGACTTTCCTGGAGGAGCTCTTGTCCACCCAGTGCGACAGGTTCACCCCTGAGGAGATTAAGAACCTGTGGACCGCCTTCCCCCCAGATGTGGCTGGCAACGTGGACTACAAAAACATCTGCTACGTCATCACACAcggagaggagaaggaggagtaAAGACGGGATGAAAGGAACAGCGCGGAGAACAGGAAGATGAAGCGATGACCCGCCGTCCCTCACTGCTCTGTCCTGCCAGTCTGTCCTCTGTccctcttttctttcctttcctttcttttgTTAATCACCAGCACTTGTTCCCTCTGTGTCTCCTCTTCACACACTCCTCCAGAAAAGACTCGTCTCCTAGAGACTCCAAGAAGAAGAGCGGAGAGGCTAATGTCTGTGGTGTCCGTCAGTGGGGAAAACGGGGttgttttcaataaaatgtTACAATCTTTTAACATCATCTCCATTTCTCCttctagctctctctctgtctctctctcttgctcaccaCTCATTTCTCCTCTTTCCAACCTTTTCTACCTTCATACCTCTACACTCACTGTTAGGTGTCTCTTTCCAGCCTAGGCTGCAACAGCTAATTAGGTAGATCTGAAAGAGTTTGTTGTGCTCGTATTCTTATGTTCTCGCTCTGGGGAATGCAAAACCAAATGGAGGGATCTCTTTCTACAATAGAGGAATCCAGAGACCCCCGTGTTGTGCTCCAGACCCTGGTGCTCTTCCTTCAGCAGTAGAAAACAAATCTAAAACATCAAAACGCATGAGGATAAGAAAAGGAATGGCACCATGAGAAAGCTCCGCCTCCTAAAAGTGATGGCAGACTTTTCactgagggagaaagaga

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K12758 MYLPF; fast skeletal myosin light chain 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU422536 lncRNA downstream 31613 37889 ~ 38206 (-) True G306840
TU422671 lncRNA upstream 6947 83699 ~ 141139 (-) False LOC111191304
TU422678 lncRNA upstream 40312 117064 ~ 117820 (-) True G306934
TU422689 lncRNA upstream 127301 204053 ~ 204448 (-) True G306943
TU422697 lncRNA upstream 150781 227533 ~ 232773 (-) True G306951
TU422718 lncRNA upstream 210146 286898 ~ 287535 (-) True G306968
XM_007235350.2 mRNA downstream 4256 57616 ~ 65563 (-) True cd2bp2
XM_022665896.1 mRNA downstream 16506 36305 ~ 53313 (-) True LOC111191303
XM_022665897.1 mRNA downstream 17056 36305 ~ 52763 (-) False LOC111191303
XM_022665888.1 mRNA downstream 46392 8769 ~ 23427 (-) False cunh16orf58
XM_007235345.3 mRNA upstream 15754 92506 ~ 101029 (-) True LOC103044774
XM_022665891.1 mRNA upstream 27993 104745 ~ 121428 (-) True tbc1d10b
XM_007235348.3 mRNA upstream 31287 108039 ~ 133593 (-) False tbc1d10b
XM_022665900.1 mRNA upstream 63418 140170 ~ 151251 (-) True LOC111191304
XM_022665898.1 mRNA upstream 76046 152798 ~ 163938 (-) True LOC103044465

Expression Profile