RNA id: XM_022665892.1


Basic Information

Item Value
RNA id XM_022665892.1
length 2244
RNA type mRNA
GC content 0.47
exon number 17
gene id rgs9
representative True

Chromosome Information

Item Value
chromosome id NW_019172846.1
NCBI id APWO02000057.1
chromosome length 1249306
location 804649 ~ 828631 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

GTTTCTGTTTCTGCAGGCAGTGTGTTTCAGTCAGCTACAGAAAGTGGATTAACACGACTGTTTTGTGCTTTTAGGAATTAATTCCTGCAAAAATGACGATAAAATTGATCCGAGACCATGGACAGCATTACCGTCCCCGGATGGCCTGTTTACAGAAGCTCGAGGCGATGGTGCTGGAGATGCAGTCTGGAGTGAAATCATCTGAACAGAAGCTGAACATTACCTCCATTCCTCATGTCATCACCGGTGAGGACATTCTTGCCTGGATTGCAAATCATATGAAGGTGGACACTCAAGAGGCACGGACTATGGGCACCATGCTGGTGGCATATGGGTTCATCTACCCTCTGCAAGACCACAAAAGGCTCATCCTGAAGCCAGACGGAAGCCTCTACCGCTTTCAGACTCCTTACTTCTGGCCTGCTCAGAAATGGAAGGTTGACGACACTGATTatgCGATTTACCTGGCCAAGAGAAACATTAGGAAGAAGGGATCGCTGGATGTATATGAGCAGGAGAACTACAACAAGCTTCACAAATGGCTCAACTATAAATGGGATTTTATCGTGATGCAGGCCAAAGAACAGTACCGgGCAGGGAAGGAGAGGAATAAGGCAGACCGGGTGGTGTTTGACTGTCAAGAGAGAGCGTTCTGGATAGTGCACCGGCCTCCACCTCGAACTCACAGCGCCATGGACTATGGAGTGGATCGCCTCATTGACCCTAATGTAGAAGAGaaaAAGACCTTTGACTACTACAAGAGAATTATCATCTTCACACAGCAAGCCATCATGAGGCCTAAGGTGAAGTCCACCGTGTCTCTTGGAGCCCTTGTTAAGTTCATGACAACGTATAAAGGCCATGACCCCTTCCTGGCCCCCTGCCTGCCCAGCAACCCCTGGCAGACTGATGACGACACCTACTGGGAGCTTAACATGAGAAGTGTTGAAACTCCCACAAAAATGAGAGTGGAGCGCTGGTCCTTCAGCTTCTTCGAGCTGCTGAGTGATCCTCGAGGACGTGCTGACTTCAAAGTGTTCCTGAAGAAAGAGTTCAGTGGTGAGAATTTGGCGTTCTGGGAAGCAGCGGAGGAGATGAAGTGGGGGGCGGCGTCATCCATCAATGAGCAAGCACAAACAATTTTCAAgactTTCTTGGCCCCCGGAGCTCCACGCTGGATCAACATTGACGGGCGGACGATGGGTCTGACAGTGAAGGGTCTGGAACATCCTCACCGCTATGTTCTTGATGCTGCGCAGACACACATCTTCATGTTGATGAAAAAGGACACCTTCTACCGATACCTGAAGTCTCCAGTTTATAAAGACATGCAGAAAAAGTCCCTCTCACCTGCTCCACACACCTTCACTGATTCTCAGCTGGAGCAGAATGCTCGAAATCGTAAACCGGGCATCGACCCCATCATCATCtggcagcaggaggaggaggagagagccAAGGCAGCCGCTGCCGCCGGACCCATCGACATAAAAAAACTGATGGCCAGCAAACTGGACCGCAAGTAAAGAGCTGAGGGGCAGTGCAGAGTTTGTTTtaggtttaatattttaaaatagctccaaatgtaagtgatcttaACATAACACAATCTTTACCTCTGAAATGAAAattatagaaaataaagaagaataaCCATTTTAAGGGGCATTCTGACCAGGTCTAGTGAATCTACTGGCTGGTTTTAGTGTGATGTCCAGATCAACCCATCCCCATTTGTTTCAGTGGCAAAAcagatatttgttttattttgttaaattttctttttttgtattagtttaTTTCGAACCATTTTACCCATTTTCTATCCAATTTGTAAGGCTTATTATCCAATCCTCATTAATATGAACTTCCCTGTTCACTAGTGGCACTCCCCCaaacaggagggtgaagactagcgtctgcctcctctgatacatgtgaagttaaccactgctccttttttttaaatgcagccaTCAAAGCTCAGAGGAAAGCTTAACAACTCAGCTCTGACTCAAAACCAGCTAACAGACaactgtgctgaccaacatcacagggggagaggaggagagaaagtcatctacctacccagagaaACAAGGCCATCTGTGTTCTCTCAGACTCTGACTGCAGATAGCAAGCAGCAAGATCTGGGAAATAATAGCGGActaagctctgccactatgaccgggagatcgctggttcgaatcctgtttatgtagcttgccatcggctactggagcc

Function

GO: NA

KEGG:

id description
K13765 RGS9; regulator of G-protein signaling 9

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU422922 lncRNA downstream 9819 793384 ~ 794830 (-) True G307130
TU422910 lncRNA downstream 28434 771201 ~ 776215 (-) True smim22
TU422884 lncRNA downstream 50269 714416 ~ 754380 (-) False G307100
TU422885 lncRNA downstream 50269 736266 ~ 754380 (-) False G307100
TU422886 lncRNA downstream 50269 744704 ~ 754380 (-) True G307100
TU422925 lncRNA upstream 54591 883222 ~ 894718 (-) True G307132
TU422945 lncRNA upstream 88465 917096 ~ 922717 (-) True G307144
TU422955 lncRNA upstream 141526 970157 ~ 986635 (-) True G307150
TU422956 lncRNA upstream 149269 977900 ~ 1044317 (-) False G307150
TU423011 lncRNA upstream 235426 1064057 ~ 1078972 (-) True G307190
XM_007233734.2 mRNA downstream 28549 771120 ~ 776100 (-) False smim22
XM_022665875.1 mRNA downstream 133944 556386 ~ 670705 (-) False LOC103025515
XM_022665874.1 mRNA downstream 133947 556386 ~ 670702 (-) False LOC103025515
XM_022665876.1 mRNA downstream 167928 556386 ~ 636721 (-) True LOC103025515
XM_007235335.3 mRNA downstream 319747 452594 ~ 484902 (-) True pdxdc1
XM_007233736.3 mRNA upstream 72330 900961 ~ 911850 (-) True LOC103045885
XM_007233738.3 mRNA upstream 99421 928052 ~ 947398 (-) False wipi1
XM_015601427.2 mRNA upstream 99421 928052 ~ 947369 (-) True wipi1
XM_007233743.3 mRNA upstream 121038 949669 ~ 965473 (-) True LOC103021341
XM_022665893.1 mRNA upstream 122524 951155 ~ 965473 (-) False LOC103021341

Expression Profile