RNA id: TU429272


Basic Information

Item Value
RNA id TU429272
length 572
lncRNA type inter_gene
GC content 0.45
exon number 2
gene id G311924
representative True

Chromosome Information

Item Value
chromosome id NW_019172862.1
NCBI id APWO02000125.1
chromosome length 627872
location 52589 ~ 54348 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

cagtaaacacacactccgtgcagcgttatacagagtttcagtgctatacagagtccagagccgtgcagctccgaggctggagcagcaaatagcattagctagcttattcactgttcagagatcagtattatctaaattttacccgtcaggtgtaaggagcagtaaacacacactccgtgcagagccgtgccgctccgaggctggagcagcaataaatagcattagctagatgctaaccgcttagctagctagctttttcactgttcagagatcagtattttctaaatttagcacttttaatactgctggagcagtattattagagttagatgctaatcgctaagcgttcaccgttcagaggtgagttatcggcctgtaagtctgtgctgctttgcctggctagcattagctagatgctaagcgctaactctctcagaggtgagttttatcagcctgtaatctgcttgtttaccgtgttaaaacaagctacgggggacgaatcgctagctaatatctcactgtcttaccagaacacgcaggattactcagtgtaacgctgtcgtttaagtttg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU429164 lncRNA downstream 35188 16102 ~ 17401 (-) False G311835
TU429281 lncRNA upstream 52388 106736 ~ 107822 (-) True G311930
TU429287 lncRNA upstream 72036 126384 ~ 155954 (-) True G311932
TU429304 lncRNA upstream 125143 179491 ~ 185152 (-) True G311947
TU429305 lncRNA upstream 125143 179491 ~ 185152 (-) False G311947
TU429312 lncRNA upstream 189295 243643 ~ 317971 (-) True G311953
XM_022666292.1 mRNA downstream 32784 18066 ~ 19805 (-) True LOC111191400
XM_015603181.2 mRNA upstream 80073 134421 ~ 148800 (-) True LOC103046328
XR_001518328.2 other upstream 570086 624434 ~ 624795 (-) True LOC107197026

Expression Profile