RNA id: TU429305


Basic Information

Item Value
RNA id TU429305
length 572
lncRNA type inter_gene
GC content 0.44
exon number 2
gene id G311947
representative False

Chromosome Information

Item Value
chromosome id NW_019172862.1
NCBI id APWO02000125.1
chromosome length 627872
location 179491 ~ 185152 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

ATatttgtcatgtctggtgctgaaagcacgtctgtgtctcccacatccagctctatctgcgattctcacagtaacaactacaatacccagaacgcaccattccatgacacaacacacactcccgatcacatgacacgtcacatgacgccaccaggaagtcccgagtactgattactcagtgtatttaaggaccatgctcacgctcacacctcgccgagtatctgtttggtatatcctacaatacaaagcgtttctcttgcccttgctattctccgtgtatgatcttgtttttgttttctaccgactttgatttttgcctgctcccttgtgttggattaccgtgtatgacctggactgtttattgtactctggatttttgcctaccctgtgatactgcctatccgtgtatgaactctggactgtcctccggttatggtatggtttctctacactgtgcatttttggtactgaccctgtttctgttgactacccctgtctactctataactttaataaaagttattttattgtatctgcaccagtctcattcctgtctggccctgacaatatta

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU429287 lncRNA downstream 23537 126384 ~ 155954 (-) True G311932
TU429281 lncRNA downstream 71669 106736 ~ 107822 (-) True G311930
TU429272 lncRNA downstream 125143 52589 ~ 54348 (-) True G311924
TU429166 lncRNA downstream 162090 16102 ~ 17401 (-) True G311835
TU429312 lncRNA upstream 58491 243643 ~ 317971 (-) True G311953
TU429347 lncRNA upstream 419890 605042 ~ 605292 (-) True G311988
XM_015603181.2 mRNA downstream 30691 134421 ~ 148800 (-) True LOC103046328
XM_022666292.1 mRNA downstream 159686 18066 ~ 19805 (-) True LOC111191400
XR_001518328.2 other upstream 439282 624434 ~ 624795 (-) True LOC107197026