Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU66023 |
| length | 466 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 2 |
| gene id | G48857 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035902.1 |
| NCBI id | CM008305.1 |
| chromosome length | 52532229 |
| location | 1803757 ~ 1904244 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0007224 | smoothened signaling pathway | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU65971 | lncRNA | upstream | 76475 | 1639979 ~ 1727282 (+) | True | G48822 |
| TU65964 | lncRNA | upstream | 192525 | 1606475 ~ 1611232 (+) | True | G48815 |
| TU65962 | lncRNA | upstream | 193461 | 1606475 ~ 1610296 (+) | False | G48815 |
| TU65906 | lncRNA | upstream | 297471 | 1491321 ~ 1506286 (+) | True | G48772 |
| TU65890 | lncRNA | upstream | 332415 | 1463023 ~ 1471342 (+) | True | G48771 |
| TU66081 | lncRNA | downstream | 12351 | 1916595 ~ 1952370 (+) | True | G48897 |
| TU66058 | lncRNA | downstream | 30177 | 1934421 ~ 1934861 (+) | False | G48887 |
| TU66120 | lncRNA | downstream | 92167 | 1996411 ~ 1997862 (+) | True | G48936 |
| TU66122 | lncRNA | downstream | 98124 | 2002368 ~ 2003124 (+) | True | G48937 |
| TU66146 | lncRNA | downstream | 149389 | 2053633 ~ 2053849 (+) | True | G48958 |
| XM_022670945.1 | mRNA | upstream | 17395 | 1772919 ~ 1786362 (+) | True | LOC103027674 |
| XM_015603140.2 | mRNA | upstream | 39682 | 1760812 ~ 1764075 (+) | True | pym1 |
| XM_022670987.1 | mRNA | upstream | 342059 | 1415274 ~ 1461698 (+) | True | LOC103041629 |
| XM_022670982.1 | mRNA | upstream | 1326461 | 354036 ~ 477296 (+) | True | ajap1 |
| XM_022670970.1 | mRNA | upstream | 1534235 | 263730 ~ 269522 (+) | True | LOC111192744 |
| XM_007231153.2 | mRNA | downstream | 95330 | 1999574 ~ 2001170 (+) | True | LOC103045867 |
| XM_007231679.3 | mRNA | downstream | 455678 | 2359922 ~ 2362224 (+) | True | LOC103028158 |
| XM_007231678.3 | mRNA | downstream | 561349 | 2465593 ~ 2474573 (+) | True | adipor1 |
| XM_022671014.1 | mRNA | downstream | 574347 | 2478591 ~ 2506196 (+) | True | klhl12 |
| XM_015600865.2 | mRNA | downstream | 605900 | 2510144 ~ 2521419 (+) | True | LOC103031418 |
| TU65829 | other | upstream | 992492 | 808155 ~ 811265 (+) | True | G48714 |
| TU66507 | other | downstream | 1078602 | 2982846 ~ 3013630 (+) | False | faf1 |
| TU66505 | other | downstream | 1078680 | 2982924 ~ 3013630 (+) | False | faf1 |
| TU66506 | other | downstream | 1078680 | 2982924 ~ 3013630 (+) | False | faf1 |
| TU66895 | other | downstream | 2340284 | 4244528 ~ 4246227 (+) | True | G49475 |
| TU67370 | other | downstream | 3714915 | 5619159 ~ 5627452 (+) | True | prok1 |
