Item | Value |
---|---|
RNA id | TU68622 |
length | 1178 |
lncRNA type | inter_gene |
GC content | 0.41 |
exon number | 6 |
gene id | G50841 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_035902.1 |
NCBI id | CM008305.1 |
chromosome length | 52532229 |
location | 9309260 ~ 9324163 (+) |
genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
species | mexican tetra (Astyanax mexicanus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU68599 | lncRNA | upstream | 55134 | 9253173 ~ 9254126 (+) | True | G50822 |
TU68595 | lncRNA | upstream | 105043 | 9204016 ~ 9204217 (+) | True | G50818 |
XR_002650140.1 | lncRNA | upstream | 302614 | 9004992 ~ 9006646 (+) | True | LOC107197475 |
TU68536 | lncRNA | upstream | 362888 | 8945273 ~ 8946372 (+) | True | G50770 |
TU68418 | lncRNA | upstream | 553251 | 8755645 ~ 8756009 (+) | True | G50656 |
TU68702 | lncRNA | downstream | 290365 | 9614528 ~ 9622057 (+) | True | G50886 |
TU68703 | lncRNA | downstream | 290440 | 9614603 ~ 9617381 (+) | True | G50887 |
TU68721 | lncRNA | downstream | 397182 | 9721345 ~ 9728225 (+) | False | G50901 |
TU68719 | lncRNA | downstream | 402375 | 9726538 ~ 9727985 (+) | False | G50901 |
TU68720 | lncRNA | downstream | 402375 | 9726538 ~ 9733234 (+) | True | G50901 |
XM_022670979.1 | mRNA | upstream | 106131 | 9085038 ~ 9203129 (+) | True | sema6a |
XM_022671109.1 | mRNA | upstream | 313508 | 8976218 ~ 8995752 (+) | True | hsd17b4 |
XM_007231611.3 | mRNA | upstream | 1039926 | 8264164 ~ 8269334 (+) | True | LOC103034488 |
XM_007231613.2 | mRNA | upstream | 1046530 | 8259603 ~ 8262730 (+) | True | LOC103035131 |
XM_007231610.3 | mRNA | upstream | 1051308 | 8254568 ~ 8257952 (+) | True | LOC103034161 |
XM_007260785.2 | mRNA | downstream | 2537 | 9326700 ~ 9335342 (+) | True | cdo1 |
XM_007260786.3 | mRNA | downstream | 21475 | 9345638 ~ 9351678 (+) | True | tmed7 |
XM_007260806.3 | mRNA | downstream | 28910 | 9353073 ~ 9354864 (+) | True | catsper3 |
XM_007260788.3 | mRNA | downstream | 33604 | 9357767 ~ 9364491 (+) | True | fem1c |
XM_007260790.3 | mRNA | downstream | 54963 | 9379126 ~ 9385691 (+) | True | ccdc112 |
TU68335 | other | upstream | 964746 | 8342940 ~ 8344514 (+) | True | G50583 |
TU68306 | other | upstream | 1030504 | 8270248 ~ 8278756 (+) | True | G50563 |
TU68311 | other | upstream | 1088098 | 8207342 ~ 8221162 (+) | True | G50568 |
trnae-cuc | other | upstream | 2324999 | 6984190 ~ 6984261 (+) | True | trnae-cuc |
TU67633 | other | upstream | 2932555 | 6371520 ~ 6376705 (+) | True | G50063 |
TU68705 | other | downstream | 319211 | 9643374 ~ 9782721 (+) | True | G50889 |
XR_002650141.1 | other | downstream | 799557 | 10123720 ~ 10130801 (+) | False | nfu1 |
TU69382 | other | downstream | 2508518 | 11832681 ~ 11882021 (+) | True | G51423 |
XR_002650027.1 | other | downstream | 3113242 | 12437405 ~ 12448182 (+) | False | znf692 |
XR_002650026.1 | other | downstream | 3113243 | 12437406 ~ 12448516 (+) | True | znf692 |
species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
---|---|---|---|---|---|---|---|---|
zebrafish (Danio rerio) | TCONS_00047515 | False | 1009 | mRNA | 0.41 | 6 | NC_007136.7 | 10793478 ~ 10803532 (+) |
grasscarp (Ctenopharyngodon idella) | CI01000153_00156999_00163735.mRNA | True | 1913 | mRNA | 0.36 | 5 | CI01000153 | 156110 ~ 164234 (-) |
bowfin (Amia calva) | AMCG00010513 | True | 493 | mRNA | 0.42 | 5 | CM030129.1 | 33040995 ~ 33057801 (+) |