RNA id: TU70456



Basic Information


Item Value
RNA id TU70456
length 200
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G52235
representative True

Chromosome Information


Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 14820912 ~ 14821111 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


ttcagacagcttcctcttacagcgtccacagttaatcctgttggatgtggttggttcttcttggtggtatgctgaaattaccctggatactgtggctcttgatgcatcacaaagacttgctgtcttggtcacagatgctccagcaagacgtgcaccaacaatttgtcctcttttgaactcgggtatgtcacccataatgt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU70454 lncRNA downstream 5162 14785411 ~ 14815750 (-) True G52233
TU70450 lncRNA downstream 71418 14743553 ~ 14749494 (-) True G52230
TU70447 lncRNA downstream 156084 14664272 ~ 14664828 (-) True G52227
TU70433 lncRNA downstream 254298 14521355 ~ 14566614 (-) True G52217
TU70471 lncRNA upstream 97292 14918403 ~ 14918852 (-) True G52250
TU70474 lncRNA upstream 102184 14923295 ~ 14924378 (-) True G52252
TU70500 lncRNA upstream 218207 15039318 ~ 15039561 (-) True G52271
TU70557 lncRNA upstream 293056 15114167 ~ 15169999 (-) True G52304
TU70605 lncRNA upstream 585874 15406985 ~ 15432449 (-) True G52350
XM_022670267.1 mRNA downstream 47485 14560028 ~ 14773427 (-) False LOC103032692
XM_022670266.1 mRNA downstream 47486 14560028 ~ 14773426 (-) True LOC103032692
XM_022670265.1 mRNA downstream 295646 14506734 ~ 14525266 (-) True LOC107197797
XM_015607566.2 mRNA downstream 307418 14506734 ~ 14513494 (-) False LOC107197797
XM_015601720.2 mRNA downstream 432853 14355158 ~ 14388059 (-) True LOC103032914
XM_022670269.1 mRNA upstream 289161 15110272 ~ 15128265 (-) True LOC103046390
XM_007256140.3 mRNA upstream 473889 15295000 ~ 15355710 (-) True LOC103031338
XM_022670273.1 mRNA upstream 1098359 15919470 ~ 15973008 (-) True LOC103030471
XM_022670274.1 mRNA upstream 1159522 15980633 ~ 16035096 (-) True LOC103030780
XM_022670281.1 mRNA upstream 1265055 16086166 ~ 16129376 (-) False neurl4
TU70366 other downstream 409301 14408936 ~ 14411611 (-) True G52161
TU70092 other downstream 1156798 13663401 ~ 13664114 (-) True G51960
TU70078 other downstream 1230069 13565998 ~ 13590843 (-) True LOC111192615
TU69924 other downstream 1497229 13285303 ~ 13323683 (-) True smim24
TU69280 other downstream 3616489 11204054 ~ 11204423 (-) True G51346
TU70552 other upstream 255185 15076296 ~ 15084568 (-) True G52299
TU70793 other upstream 1361624 16182735 ~ 16185312 (-) True G52493
TU70803 other upstream 1405125 16226236 ~ 16227174 (-) True G52503
XR_002650036.1 other upstream 1585608 16406719 ~ 16427613 (-) False zcchc4
TU70997 other upstream 1767039 16588150 ~ 16589783 (-) True G52652

Expression Profile