Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU72480 |
| length | 827 |
| lncRNA type | sense_over |
| GC content | 0.42 |
| exon number | 4 |
| gene id | LOC103028037 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035902.1 |
| NCBI id | CM008305.1 |
| chromosome length | 52532229 |
| location | 21673574 ~ 21747080 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU72443 | lncRNA | upstream | 136969 | 21606779 ~ 21607143 (+) | True | G53744 |
| TU72441 | lncRNA | upstream | 141256 | 21602644 ~ 21602856 (+) | True | G53742 |
| TU72436 | lncRNA | upstream | 280920 | 21462894 ~ 21463192 (+) | True | G53737 |
| TU72431 | lncRNA | upstream | 325225 | 21418595 ~ 21418887 (+) | True | G53732 |
| XR_002650040.1 | lncRNA | upstream | 770402 | 20947641 ~ 20973710 (+) | True | LOC111192629 |
| TU72510 | lncRNA | downstream | 89536 | 21836592 ~ 21838817 (+) | True | G53785 |
| TU72531 | lncRNA | downstream | 186246 | 21933302 ~ 21938399 (+) | True | G53801 |
| TU72552 | lncRNA | downstream | 293184 | 22040240 ~ 22040561 (+) | True | G53810 |
| TU72556 | lncRNA | downstream | 299472 | 22046528 ~ 22049505 (+) | False | G53814 |
| TU72557 | lncRNA | downstream | 299472 | 22046528 ~ 22051106 (+) | True | G53814 |
| XM_022670346.1 | mRNA | upstream | 873493 | 20832749 ~ 20870619 (+) | True | LOC103026529 |
| XM_007250106.3 | mRNA | upstream | 918438 | 20794025 ~ 20825674 (+) | False | fbxo11 |
| XM_022670345.1 | mRNA | upstream | 918438 | 20796571 ~ 20825674 (+) | True | fbxo11 |
| XM_022670344.1 | mRNA | upstream | 952929 | 20775594 ~ 20791183 (+) | True | msh2 |
| XM_007230968.3 | mRNA | upstream | 969818 | 20768407 ~ 20774294 (+) | False | LOC103041876 |
| XM_022670351.1 | mRNA | downstream | 1776 | 21748832 ~ 21786839 (+) | True | tmem94 |
| XM_022670352.1 | mRNA | downstream | 1776 | 21748832 ~ 21785799 (+) | False | tmem94 |
| XM_007250116.3 | mRNA | downstream | 45500 | 21792556 ~ 21808496 (+) | False | tdrkh |
| XM_007250115.3 | mRNA | downstream | 45502 | 21792558 ~ 21808496 (+) | True | tdrkh |
| XM_022670353.1 | mRNA | downstream | 45502 | 21792558 ~ 21808496 (+) | False | tdrkh |
| XR_454832.3 | other | upstream | 918438 | 20794025 ~ 20825674 (+) | False | fbxo11 |
| TU72167 | other | upstream | 1183278 | 20557884 ~ 20560834 (+) | False | cript |
| TU72061 | other | upstream | 1316909 | 20419221 ~ 20427203 (+) | True | LOC103044634 |
| TU72536 | other | downstream | 172169 | 21919225 ~ 21921594 (+) | True | G53804 |
| TU73348 | other | downstream | 3798936 | 25545992 ~ 25549470 (+) | False | srp19 |
| trnaw-cca_1 | other | downstream | 3817605 | 25564661 ~ 25564732 (+) | True | trnaw-cca_1 |
| trnaw-cca_2 | other | downstream | 3818186 | 25565242 ~ 25565313 (+) | True | trnaw-cca_2 |
| trnaw-cca_3 | other | downstream | 3819839 | 25566895 ~ 25566966 (+) | True | trnaw-cca_3 |
