Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU73306 |
| length | 1197 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 7 |
| gene id | G54376 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035902.1 |
| NCBI id | CM008305.1 |
| chromosome length | 52532229 |
| location | 25468054 ~ 25471996 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_002650053.1 | lncRNA | upstream | 89813 | 25358002 ~ 25378241 (+) | False | LOC111192642 |
| XR_002650054.1 | lncRNA | upstream | 89813 | 25358454 ~ 25378241 (+) | True | LOC111192642 |
| TU73222 | lncRNA | upstream | 241956 | 25225117 ~ 25226098 (+) | True | G54310 |
| TU73217 | lncRNA | upstream | 331060 | 25136435 ~ 25136994 (+) | True | G54306 |
| TU73211 | lncRNA | upstream | 359236 | 25107112 ~ 25108818 (+) | False | map3k8 |
| TU73352 | lncRNA | downstream | 80546 | 25552542 ~ 25560844 (+) | True | LOC111192644 |
| XR_002650055.1 | lncRNA | downstream | 88413 | 25560409 ~ 25561370 (+) | False | LOC111192644 |
| TU73452 | lncRNA | downstream | 174119 | 25646115 ~ 25646745 (+) | True | G54478 |
| TU73466 | lncRNA | downstream | 256387 | 25728383 ~ 25728597 (+) | True | G54489 |
| TU73476 | lncRNA | downstream | 305098 | 25777094 ~ 25778913 (+) | True | G54499 |
| XM_007260803.3 | mRNA | upstream | 26844 | 25398983 ~ 25441210 (+) | True | prdm6 |
| XM_022670394.1 | mRNA | upstream | 28295 | 25398983 ~ 25439759 (+) | False | prdm6 |
| XM_007260774.3 | mRNA | upstream | 121955 | 25323117 ~ 25346099 (+) | True | snx2 |
| XM_007260775.3 | mRNA | upstream | 121955 | 25323117 ~ 25346099 (+) | False | snx2 |
| XM_007260776.3 | mRNA | upstream | 121955 | 25323204 ~ 25346099 (+) | False | snx2 |
| XM_022670397.1 | mRNA | downstream | 50979 | 25522975 ~ 25531959 (+) | False | nudt12 |
| XM_022670398.1 | mRNA | downstream | 51011 | 25523007 ~ 25531959 (+) | True | nudt12 |
| XM_022670396.1 | mRNA | downstream | 51011 | 25523007 ~ 25531959 (+) | False | nudt12 |
| XM_007260762.2 | mRNA | downstream | 74016 | 25546012 ~ 25549494 (+) | True | srp19 |
| XM_007254046.3 | mRNA | downstream | 130405 | 25602401 ~ 25612117 (+) | True | LOC103035659 |
| TU72536 | other | upstream | 3546460 | 21919225 ~ 21921594 (+) | True | G53804 |
| XR_454832.3 | other | upstream | 4642380 | 20794025 ~ 20825674 (+) | False | fbxo11 |
| TU72167 | other | upstream | 4907220 | 20557884 ~ 20560834 (+) | False | cript |
| TU72063 | other | upstream | 5040851 | 20419221 ~ 20427203 (+) | False | LOC103044634 |
| TU73348 | other | downstream | 73996 | 25545992 ~ 25549470 (+) | False | srp19 |
| trnaw-cca_1 | other | downstream | 92665 | 25564661 ~ 25564732 (+) | True | trnaw-cca_1 |
| trnaw-cca_2 | other | downstream | 93246 | 25565242 ~ 25565313 (+) | True | trnaw-cca_2 |
| trnaw-cca_3 | other | downstream | 94899 | 25566895 ~ 25566966 (+) | True | trnaw-cca_3 |
| trnaw-cca_4 | other | downstream | 97150 | 25569146 ~ 25569217 (+) | True | trnaw-cca_4 |
