RNA id: TU74852


Basic Information

Item Value
RNA id TU74852
length 208
lncRNA type inter_gene
GC content 0.41
exon number 3
gene id G55507
representative False

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 30426571 ~ 30430122 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

agtgatgatgaactctgaagctacatgaagtttgaaggtgtgtagtgatgatgaactcttgaagctacatgaagtttggaggtgtgtagtgatgaactctgaagctacatgaagtttggaggtgtgtagtgatgatgaactctgaatctacatgaagtttggaggtgtgcagtgatgaactctgaagctacatgaagtttggaggtgt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU74843 lncRNA upstream 77309 30347016 ~ 30349262 (+) False G55502
TU74838 lncRNA upstream 104879 30316400 ~ 30321692 (+) True G55499
TU74765 lncRNA upstream 291834 30133115 ~ 30134737 (+) True G55449
TU74731 lncRNA upstream 480848 29945437 ~ 29945723 (+) True G55429
TU74730 lncRNA upstream 481415 29944930 ~ 29945156 (+) True G55428
TU74874 lncRNA downstream 52789 30482911 ~ 30494675 (+) True G55525
TU74887 lncRNA downstream 99743 30529865 ~ 30530274 (+) True G55533
TU74891 lncRNA downstream 168490 30598612 ~ 30601438 (+) True G55537
TU74955 lncRNA downstream 205462 30635584 ~ 30636198 (+) True G55591
TU74971 lncRNA downstream 329680 30759802 ~ 30760952 (+) True G55605
XM_022670914.1 mRNA upstream 76950 30340579 ~ 30349621 (+) True LOC103040742
XM_022670482.1 mRNA upstream 153450 30253550 ~ 30273121 (+) True LOC103040008
XM_022670912.1 mRNA upstream 224365 30176593 ~ 30202206 (+) True LOC103041750
XM_015605288.2 mRNA upstream 268675 30152436 ~ 30157896 (+) True LOC103042059
XM_022670487.1 mRNA downstream 184194 30614316 ~ 30625382 (+) True LOC103026908
XM_022670485.1 mRNA downstream 229604 30659726 ~ 30749916 (+) True LOC103026612
XM_022670491.1 mRNA downstream 417785 30847907 ~ 30931517 (+) True slc15a4
XM_022670490.1 mRNA downstream 417787 30847909 ~ 30939711 (+) False slc15a4
XM_015604352.2 mRNA downstream 1265496 31695618 ~ 31728020 (+) False golga1
TU74460 other upstream 1671754 28754030 ~ 28754817 (+) True G55218
TU74355 other upstream 1777458 28646064 ~ 28649113 (+) False asphd2
TU74356 other upstream 1777458 28646064 ~ 28649113 (+) False asphd2
TU74065 other upstream 2566622 27837306 ~ 27859949 (+) False ipo11
TU73937 other upstream 2713993 27703772 ~ 27712578 (+) True G54841
TU74882 other downstream 98740 30528862 ~ 30550061 (+) True G55532
TU74844 other downstream 191804 30621926 ~ 30625046 (+) True G55502
TU75269 other downstream 1490698 31920820 ~ 31924095 (+) True G55831
TU75290 other downstream 1544559 31974681 ~ 31977419 (+) True G55844
TU75720 other downstream 2928092 33358214 ~ 33366012 (+) True G56160

Expression Profile