RNA id: TU76403



Basic Information


Item Value
RNA id TU76403
length 507
RNA type TUCP
GC content 0.51
exon number 2
gene id G56638
representative False

Chromosome Information


Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 35420830 ~ 35458874 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


ggagtgtgtgtggtgtggggtatgtgtggtgtggagtgtgtggggtggagtgtgtttggtgtggggtatgtgtggtgtggaatgtgtgtagtgtggggtgtagactgtgtgtggtgtcgggtgtgtgtgtggtgtggactgtggagattgtgtggtgtggagtatgtgtggtgtggaagtGAGTGTGGGGAGTGGACTGTGTGTCGTGTGGggtgtgtggtgtggggtgtgtgtagtgttgtattGGTTCTGGTGTGGGTTGTGTTCAGCAGTCTCTTCTCCATACAGATACAGTACTGAGGAGCAGGGCAGAGAGGGGGGCCGTGCGCAGGATCGgctggtgtgtgtgagatggcCAACATTCcgcccattcattcctatggggaaAGTTCGTACGATAATTTTACGAAAACCGTAAATCGTATCGGTGAGATCAGCATATCGTCTGAAACGTCTCTGCAAGTTCTGTATGTCTTGTGAATTTCGTGGTTCTAGCTCGAAAATTGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU76382 lncRNA downstream 53529 35350825 ~ 35367301 (-) True G56620
TU76373 lncRNA downstream 96220 35321989 ~ 35324610 (-) False LOC103038782
TU76354 lncRNA downstream 141940 35275947 ~ 35278890 (-) True G56602
TU76352 lncRNA downstream 141940 35277921 ~ 35278890 (-) False G56602
TU76350 lncRNA downstream 148540 35265893 ~ 35272290 (-) True G56600
TU76412 lncRNA upstream 15684 35437833 ~ 35440647 (-) True G56645
TU76423 lncRNA upstream 121562 35543711 ~ 35543995 (-) True G56656
TU76448 lncRNA upstream 130687 35552836 ~ 35553987 (-) True G56678
TU76451 lncRNA upstream 157832 35579981 ~ 35580235 (-) True G56681
TU76463 lncRNA upstream 220656 35642805 ~ 35643064 (-) True G56693
XM_022670561.1 mRNA downstream 25586 35390808 ~ 35395244 (-) True LOC111192675
XM_022670957.1 mRNA downstream 49870 35367649 ~ 35370960 (-) True LOC111192733
XM_022670551.1 mRNA downstream 88396 35321985 ~ 35332434 (-) True LOC103038782
XM_007229126.3 mRNA downstream 100042 35316282 ~ 35320788 (-) True LOC103031304
XM_007229128.3 mRNA downstream 105257 35310689 ~ 35315573 (-) True LOC103031932
XM_022670574.1 mRNA upstream 410537 35832686 ~ 35867084 (-) True bicdl1
XM_007229104.3 mRNA upstream 520538 35942687 ~ 35947822 (-) False mrps36
XM_022670569.1 mRNA upstream 533954 35956103 ~ 35964161 (-) True pola2
XM_022670567.1 mRNA upstream 549828 35971977 ~ 35992502 (-) True LOC103036583
XM_022670568.1 mRNA upstream 549828 35971977 ~ 35992500 (-) False LOC103036583
TU76360 other downstream 121241 35296346 ~ 35299589 (-) False c6h22orf39
XR_002650079.1 other downstream 127409 35285422 ~ 35293421 (-) False acaa2
TU76301 other downstream 312437 35093551 ~ 35108393 (-) True LOC103038119
trnaa-agc_13 other downstream 2060389 33360369 ~ 33360441 (-) True trnaa-agc_13
XR_002650076.1 other downstream 2243180 33149074 ~ 33177650 (-) False LOC103023237
TU76749 other upstream 344621 35766770 ~ 35767677 (-) True G56887
TU76790 other upstream 417298 35839447 ~ 35844514 (-) False bicdl1
TU76808 other upstream 506331 35928480 ~ 35947810 (-) False mrps36
TU76807 other upstream 520493 35942642 ~ 35947810 (-) True mrps36
XR_002650081.1 other upstream 549581 35971730 ~ 35992502 (-) False LOC103036583

Expression Profile