RNA id: TU76859



Basic Information


Item Value
RNA id TU76859
length 741
lncRNA type inter_gene
GC content 0.40
exon number 2
gene id G56967
representative False

Chromosome Information


Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 36219881 ~ 36221207 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


ctgtctctctctctctctctcacttttttatatttttgcacatCTTCCCCTTTTCTCCcctttgttttactttattttgactcgtactcactctttttctctctctctctctctctctctctctctctctggccgtGTCTCGTGCGTGTAGCTCTAGTGGTGCCGTTTGTTCAGTAGATGTTGATGATGTTCTTGCGGCTGGTGCTGTGTTTCTGCGCATGCATGCTTGCCCTGTCTCTTTGTATGTGCCAGTCTTAGGGGTCCAGTCCTCCAGCAAGTTCACGCCTCTCACCTCCGACGGTTGAACTTGCTCCTTCAGTTGTGTTCGTGCCTGTggtttacttttattattttggatttcttttatttttttatttttttaattgatatatttttttttgttcatttttagcaGGTTTTAGTTTTGCCACCTATGCATGGCCACTTGCTTCACACCCCTGAGTTCTGACTTTTAGATcttctttaattttttactttctaCAAAGCCAGGAATCTTCAGTGGTTGTTTTTACgttgttttacagtattttcagTTGGATGTTGAACACAGATATTTACCTCATTTCTGACGGATTGGTTTGAGCTGCTGTTTGAATCGGCTCTGAAAGACTAATGTTGTTGTTTATCTCCATTTATAAAGAAAGAGTATTGCAGTGCTGAGCCGTGTGTGTATTCTCTATATTGTGCTTTTGGATTCCCTTTTCCCTGCAGACCTTCTCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU76832 lncRNA downstream 121884 36079787 ~ 36097997 (-) True G56946
TU76826 lncRNA downstream 151720 36050378 ~ 36068161 (-) True G56940
TU76825 lncRNA downstream 205758 36013407 ~ 36014123 (-) True G56939
TU76793 lncRNA downstream 327825 35870251 ~ 35892056 (-) True G56914
TU76795 lncRNA downstream 345853 35871836 ~ 35874028 (-) True G56916
TU76856 lncRNA upstream 787 36221459 ~ 36225010 (-) True G56966
TU76879 lncRNA upstream 10407 36231079 ~ 36233346 (-) True G56982
TU76904 lncRNA upstream 77387 36298059 ~ 36341036 (-) True G57001
TU76902 lncRNA upstream 93353 36314025 ~ 36331568 (-) True G57000
TU76928 lncRNA upstream 187503 36408175 ~ 36408452 (-) True G57013
XM_007229097.3 mRNA downstream 10222 36208216 ~ 36209659 (-) True c6h9orf116
XM_022670576.1 mRNA downstream 148886 36016893 ~ 36070995 (-) False LOC103036273
XM_022670577.1 mRNA downstream 148886 36016893 ~ 36070995 (-) True LOC103036273
XM_022670924.1 mRNA downstream 211894 35993525 ~ 36007987 (-) True unc45b
XM_022670567.1 mRNA downstream 227379 35971977 ~ 35992502 (-) True LOC103036583
XM_022670925.1 mRNA upstream 5457 36226129 ~ 36261545 (-) True LOC103023491
XM_007229100.3 mRNA upstream 111796 36332468 ~ 36340503 (-) True anapc7
XM_022670583.1 mRNA upstream 111796 36332468 ~ 36339921 (-) False anapc7
XM_022670585.1 mRNA upstream 123930 36344602 ~ 36385497 (-) False LOC103035014
XM_022670584.1 mRNA upstream 123930 36344602 ~ 36385497 (-) True LOC103035014
TU76819 other downstream 218712 35998420 ~ 36001169 (-) False unc45b
XR_002650081.1 other downstream 227379 35971730 ~ 35992502 (-) False LOC103036583
TU76808 other downstream 272071 35928480 ~ 35947810 (-) False mrps36
TU76807 other downstream 272071 35942642 ~ 35947810 (-) True mrps36
TU76790 other downstream 375367 35839447 ~ 35844514 (-) False bicdl1
TU76883 other upstream 32695 36253367 ~ 36261542 (-) False LOC103023491
TU76887 other upstream 98384 36319056 ~ 36320695 (-) True G56987
TU76929 other upstream 182178 36402850 ~ 36403298 (-) True G57014
TU76959 other upstream 469673 36690345 ~ 36738214 (-) False LOC107196826
TU76961 other upstream 469673 36690345 ~ 36723365 (-) False LOC107196826

Expression Profile