RNA id: TU76929



Basic Information


Item Value
RNA id TU76929
length 449
RNA type TUCP
GC content 0.45
exon number 1
gene id G57014
representative True

Chromosome Information


Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 36402850 ~ 36403298 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


agtgtgaaggttcaattagcagggtaagagcacagttctgctctaaatattacaatgaacacaacattatgggagacataccagagttcaaaagaggacaaattgttggtgcacgtcttgctggagcatctgtgaccaagacagcaagtctttgtgatgcatcaagagccacggtatccagggtaacgtcagcgagataccaccaagaagcaccaaccacatccaacaggattaactgtggacgctgtaagaggaagctgtctgaaagggatgttcgggtgctaacccggattgtatccaaaaaactccataaaaccacggctgatcaaatcacgcagaattcaatgtgcacctcaactctcctgtttccaccagaactgtccgtcaccacaatcaattattgtgctctaaaaccaggtgtttcagtttcattgtccaacccctgtaaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU76904 lncRNA downstream 61814 36298059 ~ 36341036 (-) True G57001
TU76902 lncRNA downstream 71282 36314025 ~ 36331568 (-) True G57000
TU76879 lncRNA downstream 169504 36231079 ~ 36233346 (-) True G56982
TU76856 lncRNA downstream 177840 36221459 ~ 36225010 (-) True G56966
TU76860 lncRNA downstream 181643 36219881 ~ 36221207 (-) True G56967
TU76928 lncRNA upstream 4877 36408175 ~ 36408452 (-) True G57013
TU76924 lncRNA upstream 7937 36411235 ~ 36412749 (-) True G57010
TU76925 lncRNA upstream 8887 36412185 ~ 36412749 (-) False G57010
TU76927 lncRNA upstream 196740 36600038 ~ 36603428 (-) True G57012
TU76964 lncRNA upstream 422469 36825767 ~ 36833067 (-) False G57043
XM_022670585.1 mRNA downstream 17353 36344602 ~ 36385497 (-) False LOC103035014
XM_022670584.1 mRNA downstream 17353 36344602 ~ 36385497 (-) True LOC103035014
XM_022670586.1 mRNA downstream 17355 36344602 ~ 36385495 (-) False LOC103035014
XM_007229100.3 mRNA downstream 62347 36332468 ~ 36340503 (-) True anapc7
XM_022670583.1 mRNA downstream 62929 36332468 ~ 36339921 (-) False anapc7
XM_022670587.1 mRNA upstream 9574 36412872 ~ 36492714 (-) True med27
XM_022670590.1 mRNA upstream 202109 36605407 ~ 36641563 (-) True LOC103045855
XM_022670592.1 mRNA upstream 202109 36605407 ~ 36641557 (-) False LOC103045855
XM_022670926.1 mRNA upstream 276868 36680166 ~ 36746634 (-) True LOC107196826
XM_022670594.1 mRNA upstream 351868 36755166 ~ 36778310 (-) False LOC103045561
TU76887 other downstream 82155 36319056 ~ 36320695 (-) True G56987
TU76883 other downstream 141308 36253367 ~ 36261542 (-) False LOC103023491
TU76819 other downstream 401681 35998420 ~ 36001169 (-) False unc45b
XR_002650081.1 other downstream 410348 35971730 ~ 35992502 (-) False LOC103036583
TU76808 other downstream 455040 35928480 ~ 35947810 (-) False mrps36
TU76959 other upstream 287047 36690345 ~ 36738214 (-) False LOC107196826
TU76961 other upstream 287047 36690345 ~ 36723365 (-) False LOC107196826
TU76973 other upstream 382164 36785462 ~ 36792438 (-) False LOC111192678
TU77626 other upstream 3118246 39521544 ~ 39562891 (-) True LOC103030299
TU77628 other upstream 3118246 39521544 ~ 39562891 (-) False LOC103030299

Expression Profile