Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU77532 |
| length | 827 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 5 |
| gene id | G57505 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035902.1 |
| NCBI id | CM008305.1 |
| chromosome length | 52532229 |
| location | 39560428 ~ 39562898 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU77523 | lncRNA | upstream | 63075 | 39497028 ~ 39497353 (+) | True | G57498 |
| TU77495 | lncRNA | upstream | 183367 | 39374000 ~ 39377061 (+) | True | G57473 |
| TU77476 | lncRNA | upstream | 189843 | 39365656 ~ 39370585 (+) | True | frmd3 |
| TU77473 | lncRNA | upstream | 296453 | 39263171 ~ 39263975 (+) | True | G57457 |
| TU77441 | lncRNA | upstream | 406952 | 39109244 ~ 39153476 (+) | False | agtpbp1 |
| TU77572 | lncRNA | downstream | 163803 | 39726701 ~ 39730031 (+) | True | G57538 |
| TU77576 | lncRNA | downstream | 174662 | 39737560 ~ 39749700 (+) | True | G57542 |
| TU77690 | lncRNA | downstream | 242380 | 39805278 ~ 39810668 (+) | True | G57636 |
| TU77693 | lncRNA | downstream | 249337 | 39812235 ~ 39812766 (+) | True | G57638 |
| TU77694 | lncRNA | downstream | 249685 | 39812583 ~ 39813547 (+) | False | G57638 |
| XM_007238037.2 | mRNA | upstream | 151 | 39541728 ~ 39560277 (+) | False | LOC103029767 |
| XM_007238036.2 | mRNA | upstream | 151 | 39541729 ~ 39560277 (+) | True | LOC103029767 |
| XM_022670630.1 | mRNA | upstream | 19886 | 39529615 ~ 39540542 (+) | True | LOC103030832 |
| XM_022670631.1 | mRNA | upstream | 19886 | 39529616 ~ 39540542 (+) | False | LOC103030832 |
| XM_007238046.3 | mRNA | upstream | 31923 | 39524615 ~ 39528505 (+) | True | LOC103032512 |
| XM_022670640.1 | mRNA | downstream | 259945 | 39822843 ~ 39829393 (+) | True | pqbp1 |
| XM_022670647.1 | mRNA | downstream | 280413 | 39843311 ~ 39961259 (+) | True | LOC103038904 |
| XM_022670648.1 | mRNA | downstream | 281281 | 39844179 ~ 39955823 (+) | False | LOC103038904 |
| XM_022670649.1 | mRNA | downstream | 281281 | 39844179 ~ 39955755 (+) | False | LOC103038904 |
| XM_022670643.1 | mRNA | downstream | 281283 | 39844181 ~ 39961259 (+) | False | LOC103038904 |
| TU76991 | other | upstream | 2554630 | 37005273 ~ 37005798 (+) | True | G57066 |
| TU76490 | other | upstream | 3597109 | 35956104 ~ 35963319 (+) | False | G56701 |
| TU76213 | other | upstream | 4135955 | 35420787 ~ 35424473 (+) | True | G56504 |
| TU76153 | other | upstream | 4321328 | 35226496 ~ 35239100 (+) | False | ikbkb |
| TU76054 | other | upstream | 4808865 | 34713218 ~ 34751563 (+) | True | G56414 |
| TU77738 | other | downstream | 481755 | 40044653 ~ 40046467 (+) | True | G57664 |
| trnaw-cca_40 | other | downstream | 1037093 | 40599991 ~ 40600062 (+) | True | trnaw-cca_40 |
| TU78022 | other | downstream | 1112142 | 40675040 ~ 40680555 (+) | True | G57856 |
| TU78217 | other | downstream | 1811921 | 41374819 ~ 41377430 (+) | False | LOC103032352 |
| TU78242 | other | downstream | 1875129 | 41438027 ~ 41438911 (+) | True | G58025 |
