Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_007236964.3 |
| length | 1119 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 8 |
| gene id | LOC103025235 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035902.1 |
| NCBI id | CM008305.1 |
| chromosome length | 52532229 |
| location | 49867618 ~ 49990417 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | description |
|---|---|
| K23531 | CABP1_2_4_5; calcium-binding protein 1/2/4/5 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU80864 | lncRNA | upstream | 137748 | 49755283 ~ 49755595 (+) | True | G60017 |
| TU80860 | lncRNA | upstream | 209677 | 49680642 ~ 49683666 (+) | True | G60013 |
| TU80791 | lncRNA | upstream | 346362 | 49544649 ~ 49546981 (+) | True | G59960 |
| TU80829 | lncRNA | upstream | 389620 | 49503517 ~ 49503723 (+) | True | G59996 |
| TU80819 | lncRNA | upstream | 413986 | 49479085 ~ 49479357 (+) | True | G59986 |
| TU80898 | lncRNA | downstream | 22784 | 49939516 ~ 49988936 (+) | False | G60034 |
| TU80896 | lncRNA | downstream | 71015 | 49987747 ~ 49990321 (+) | True | G60034 |
| TU80905 | lncRNA | downstream | 84177 | 50000909 ~ 50001120 (+) | True | G60041 |
| TU80913 | lncRNA | downstream | 108757 | 50025489 ~ 50026007 (+) | True | G60047 |
| TU80931 | lncRNA | downstream | 164904 | 50081636 ~ 50085033 (+) | True | G60059 |
| XM_007236960.3 | mRNA | upstream | 83264 | 49797273 ~ 49810079 (+) | True | LOC103024709 |
| XM_007237057.3 | mRNA | upstream | 101870 | 49784459 ~ 49791473 (+) | True | LOC103027656 |
| XM_007236959.3 | mRNA | upstream | 111862 | 49777590 ~ 49781481 (+) | True | LOC103024391 |
| XM_007236955.3 | mRNA | upstream | 145387 | 49693062 ~ 49747956 (+) | True | LOC103022925 |
| XM_007236951.3 | mRNA | upstream | 216734 | 49668729 ~ 49676609 (+) | True | dedd |
| XM_022670837.1 | mRNA | downstream | 16033 | 49932765 ~ 49964517 (+) | False | LOC103027051 |
| XM_022670838.1 | mRNA | downstream | 16038 | 49932770 ~ 49968192 (+) | True | LOC103027051 |
| XM_007236966.3 | mRNA | downstream | 53379 | 49970111 ~ 49987113 (+) | True | b3gnt3 |
| XM_022670845.1 | mRNA | downstream | 155587 | 50072319 ~ 50091417 (+) | True | ccdc124 |
| XM_022670938.1 | mRNA | downstream | 194735 | 50111467 ~ 50193499 (+) | True | kcnn1 |
| TU80792 | other | upstream | 455730 | 49423516 ~ 49437613 (+) | True | G59961 |
| TU80616 | other | upstream | 894872 | 48998160 ~ 48998471 (+) | True | G59806 |
| TU80591 | other | upstream | 1013720 | 48870167 ~ 48879623 (+) | True | G59782 |
| TU79888 | other | upstream | 3011452 | 46852364 ~ 46881891 (+) | True | G59257 |
| TU79487 | other | upstream | 4103189 | 45789711 ~ 45790154 (+) | True | G58971 |
| XR_002650102.1 | other | downstream | 722762 | 50639494 ~ 50652274 (+) | False | LOC103045694 |
| TU81516 | other | downstream | 1359468 | 51276200 ~ 51286140 (+) | True | G60481 |
| TU81517 | other | downstream | 1365258 | 51281990 ~ 51286140 (+) | False | G60481 |
| TU81531 | other | downstream | 1486602 | 51403334 ~ 51409013 (+) | False | hdac6 |
| TU81766 | other | downstream | 1848359 | 51765091 ~ 51765620 (+) | False | otud5 |
