RNA id: XM_022671095.1


Basic Information

Item Value
RNA id XM_022671095.1
length 7307
RNA type mRNA
GC content 0.41
exon number 10
gene id slc20a2
representative False

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 8109822 ~ 8176783 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

AAGCGCCCGGATGCGAACAAGCAACAGTCAGGACAACATGGTCGCTTGACTGAAGGCTGCGATTACAGACGCGTGCTGGAATCTCAGCGCTCCCACTCAGACACTACCTCAGAAAACGGGGGGCTCGCTTCACTGCCGGAGCCTTCACCGCTGGGGAGGACGACCTCGTGCTTTACGGACTAATTTCTCTCACACGGCTGAAGACTTCTCAGTGGACAGGACACGCAGAGGGCCGAAGAATGGAATGCTCTCTCCTGCCTACATCACAGCTCACAGCTCCAAAGACTGAGGTTAAACGGCTTAGTTAGCAGTGTGCCTCTCCCCCTAGAACTTGCACAGCCAGGGGAGAAGGAGTGACAAACAAAAGAGAaggggaatttttttttttcctttaagaaTAAAGCACAGCACCTTACTTCGCTTAGTTCAGACGTCCggagttatttatttttggattatttgagttctgatcCTGCTCGAGAACCGACACCAAGATGGATTTAGAGCCGTACCTATGGATGGTCATAATTGGCTTCATCATCGCCTTCGTACTGGCGTTTTCAGTGGGAGCCAATGACGTGGCGAACTCGTTTGGCACGGCCGTGGGCTCGGGAGTGGTCACGCTGCGCCAGGCCTGCATCCTGGCCTCCATTTTTGAAACCCTGGGCTCCATGCTACTCGGGGCCAAAGTGGGTGAAACCATTCGGAAGGGAATTATAGACGTCAGCTTGTACAACGAAACCGTGCCCATACTGATGGCAGGAGAGGTCAGCGCCATGGTCGGGTCTGCGGTTTGGCAGCTCATTGCCTCGTTTCTGAAGCTGCCCATTTCTGGAACTCATTGTATCGTGGGATCTACTATAGGCTTCTCCATGGTGGCTATTGGCACCAAGGGAGTGCAGTGGATGCAGCTGGTCAAAATCGTTGCCTCCTGGTTCATCTCCCCTCTGCTGTCAGGCATCATGTCTGGCCTGCTCTTCTACGTAATCAGATATTTCATTCTTAGCAAGgatGATCCTGTTCCAAATGGCCTTCGTGCTTTGCCCCTCTTCTACGCTTCTACTATCGGCATAAACACTTTCTCCATCATGTACACAGGAGCTCCAATGCTTGGTATAGAGATGCTCCCAGTATGGGCCATAGCTCTGATCACCCTGGCGGGCTCTCTGGTGTGTTCTGCGCTGGTCTGGATCTTCGTCTGCCCCTGGATGAGAAGGAAAATAGCAAGTCAGCTGAAAAAAGAGCATGTTCTCTCGCGCATCTCTGACGAGAGTCTTGATAAAATtccagaggaggaagaggaggctcCGGTGTTTAAGGAACTTCCGGGGGCTAAGGGGAACGACGATGCGGAACTGCCCCTGACCGGGGAGTCCACTGGGGAGTTGAACAGCTTGGCCAATGGCGGCACCGTCCTGCCTAATGGCAGGGTGTACGGCCGCACACACTCCATGACCAACGGGTGCCTGAAGTCGCCTTTGTCCAACGGAAGCTTCAGCTTTGACGGACACATGCGCAGCGACGGTCAGGTGTACCACACTGTGCACAAGGACTCTGGGCTCTACAAGGATCTGCTGCACAAGATCCACGTGGGTCGCCTGGAGGACGAGCGCGCCAACTCACGACCCGACAACAACTACCGAGTCCTGCGGCGCAACAACAGTTACACGTGCTACACAGCAGCCATCTGCGGCATGCCCGTCCAGCCTCTGATCCGCTCCGAGTCCACCGCTTCACCTCCGGAGGACAGCGAGAAGCTGGTGGGAGACAGCGTCTCCTACTCCAAGAAGCGCCTGCGCTACGACAGCTACTCCAGCTACTGCAACGCGGTGGCCGAGGCGGAGATCGAGGCGGAGGAGGGCGGGGTGGACGTGAAGCTGGGTGCGGAGAAACACGATCCAGCGCCCGCTGCTGGAGGAGCGCTGGAGGACTGTGTTGATGAGGACAAGGAGGAGAGGGACAAGCCGCAGGTCTTCCTGCTTTTCCATTTCCTGCAGATCCTCACTGCCTGCTTCGGCTCGTTTGCACATGGTGGCAATGATGTCAGTAATGCCATTGGTCCATTGGTGGCTCTGTGGATGATCTACGAGCAGGGCGGCGTGATGCAGAACTCCACTACCCCTGTATGGCTGCTGTTCTATGGTGGTGTTGGCATCTGCGCTGGTTTGTGGGTGTGGGGCCGCCGAGTCATCCAGACCATGGGCAAGGACCTCACCCCCATCACCCCATCCAGgTGGGCTCAGTGGTCGCCGTGGGTTGGCTCCGCTCCCAGAAGGCAGTGGACTGGCGCCTCTTCCGGAACATCTTCCTGGCCTGGTTCGTCACGGTCCCTGTAGCCGGCCTCTTCAGCGCTGCTGTCATGGCCCTGTTTGTCTACGGCATCCTGCCTTACGTATGAGAGGAAGAACGAGGGATAGAGAGAATGTATAGAGAGGTGATGGTTGGGGCAAAGGcaagagaaaaatataataaattagacCAGAAGATGGTTAGATGAAGAGACAGACGGGTTGGAATAGGTTTGGAATTGATGGAAATGGATGAAGAGTATAAAGGAAGTGGGGGAggctttaaaaatgaaaacctgCCTGAGGAGCATCCAGAATTTTCTGACATAAATGTTCTTCATTTTATCTGCaagtatttattttcattttcttttttttctttatttcagtttttagcTGTTGTTGTAAAGTTTTCACACGTCATTACAGTATGTCTCATGAAGCAGTGCATTTCattatcaacaaaaaaaaaatacaaaaaaattctgGCAGAGTTTGCTCGCAGTCAAGActgggtgggtaaatggtgCGATCCGCTCACAAAAATAGGCACACAAGTAAATATGCACATATCAGAAGTGCACATATCTTAAATGACTACATATTCAGTATCAGTGAGGAGAAAAGAGGACACATAAAGCAACAGTTTAGATCTGAATAATCTGTCTGTTACATAAAATGCTTGGGCCCAATTTAAGACTGTTTTCAGTTGTTtaaatacatatactgtatacactgaGATGCCAAAAAACAGTTTGAGTGATTTATTAATTACATGCCAAtaatacactgcaagaaaactGCTGTATTTAATAGAGCTACAATGCAGAGTCCATAAAATcagttaaaatattgtaaaaactgtaaatcaAGCTAATCCTGAGCTAGACATTATGttcaaatttatataaaatttagatttctttatttttaatatcaatatcaattcCAATATCAAAATGAATAGTAGCAAAACCACCATCAGTCATTACACACTAGTGCTCTGCCCTTTCTGTTCAGCTTGAATGCAGTGAACCGATGGCAGTGCCCTGTAATGAATATCAGAAATACTAAGAGATACTGTAAATTATATGCATTACTTTTACAATTCATATTGACATTGACATTGTTATATATCCCTGAATTTATCATACCTCAACAATCCTCTGCCATCCAGAAACAAAGCTAGTAagagaaacacacaaaacagtttaagacactttaagaatgattttaattattattattatcattggGTTAAAagcccttttattttatctttgtttATATCTAGATTTCCGTTCAACCTTTTTATTTGTCAGAATATATAAAGTAACAAGGAGGGTATTTTAACTGTATGCTAACATTTCTGCTGTACATATTTTCCATGATGAATTTTGAAAGgattgaatttttattttgtcttgacGTTTCTAAATATCATAGAATCAGAAGTGATGGGTCAGACTATTTACAGATATGAAGCTGAGACAGAGTTATTAATATTGTggataaatttaaataataatagtaatattaaaatactgtgttCTCTGTTTAAAACTCtgtttaaaaaactgattttgtgtattaatattacataaagtaaataatagaaatatGAGTAAACCACATTTCTATCATATCAGCACCAAAACAATTGGTATTATCCATTTAGACCAGCCCAGTTAAGCAACACTCTTTCAAAATTGATTATTTGAGATTATTGTGATtgtgcttttaatttaatttaatttaatttaaaaatttaacatttaattttgtattgTAGAATCATTCCCTCCAAAGTCTGCTCCAAAGTAATTTGTTCTCTCTGCCAaaattcaaatgtatttgtCAGTGTTCAGTTAATAATGAGCATCATATCTTACTCACTGAAATAGGtagttaaatttaaatattttaaagttacaTATGTTTCAATGGAACATCACAAGACCTAATATTGGTTTGGTGACTTGATCACAATAAGTTAAAGCAttatagttataaaaaaaatcaggactAGCTAATTTGTACTGATTTAACAGTTATTAAAAAAGGACTTGGTCCTGTAGGTCAATAATTATAACTGAACTGTAGGTGCCTCAATAAAATTCTCCTtgctcttctgttttttttttttttttttttttacttttttaccaaAGATTTCTGTTTAGTTCAGTTTCATTCTCACATTtatcatcatgtttttttagattagtTTTTTTCCTGAGACATATTTTGAAAAGTACTTCAGTGTTTGTGTGCCGATAAGACATTGTGAGAAAACAGTGTATTAGAACAGTGTATTAAGATGCAGGTAGATCCCAAAAAgtagaatataaaaaatgccAAGATAAAACTTATACGTGCAGCTACAGCCAAAACccattgaacacacacacacacacacacacacacacacacacacacacacatacaaacacacacacacgtgcaccaGCATTCACACATACTGATTTCGATGATATTGTCTAGATATTAACGGCTACCAGCGCAcaaattaaaaattacattattatatatatatatatatatacacggtATATTGCCACAAGATGTATATCCACTTTACTCTCAATTCAAACAGTCATGAATACATAAATTAATACATGCAGCTGATGACATTGTGAGACACCTCAACCTCAAAAACAGGatttgacagacagacagataaacagacagacagatagatagatggacaggACCAcatgcaggtttttttttatctgctgttGCAGCGACACAAATGGGTCAAAACTGAAAGGTCAAAAGGAAGCattgaattaaatgtttttattatttttggtgGCCTGTTTTTGGAACCTGTAGTCAGAAAGTTTCCATACTGACACATGATGacaggatgatgatgatgaaaatgACGTGCGAGTCAAAGAGGTCAAAACATTGCTCGGTCAGTTTCGATGCCCACTGGTCATTCAGTTCTGTTGAGTTGTGTTTAGCCGTGCCGTTTTCtattgatggtggtgatggtgtttGTTTAGCCAGGTGTGGCTGATGTTGATGACATGAgacaccttaaaaaaaagaaaagaaaagaaaaagaaaaactctgCCTCTGGACAGTCACCAGATTTGTACAAACGTGTGGCTTTGAACCAATGCAAAGtgttaactttttattttcctcgtgtgtgtgtgtgtgtgcgcgtgtattatactttttatgtttttatctttcATCATGAACAAAAATCTATGCTTAGACGGCCATTTGCCTTGTAATATTGTGCTTTACTGTTTGTCAGATACAGTAACTTCAGTACTGTGGTGTTTACATCTTACTTCTTATCATATTGTAGAAATAACTCATTACAGTTGCCTAAAAACGTCAATGAAAGACAACGTGCTTTTAACGTTTATCAAATCGAAATACACGAATTAGCCAGGAATAGCGCAGAGCTGTCTCACGTCCTTTCGTGTTTTAGTTTGTAGCGGTGTGAATTCTGGTCATGCGTTACTTTTACATCGCGAGTAGgtttaaatatacaataaataataaaactgtacACGGTgagtgtgatttaaaaaaaataaatgaatcaacAGATATATAAATTTCATTCAAACTATATTTTTCTACATATCTGAGTTTTACCTTGAGTGCTGACCTTGAATGAACTGGGCTCAGACAGGTCCTGATAGACATTTATGTGATACTAAGAAATGGatctaaactatatatatatatatatatatatatatatatatatatatatatatatatatatatatactgatgtAATGTTGTAATGGTTTCTTCTTAATGAATgcaatataatacagtatgtaacAGTATAATTCAGGTAAGGGTTTAAcagactaaaaaaagaaaacaacaaaaactctGAAAGATTCCATGTATCCATTGCTTCTTTTGCCCAGGCAATTCTCTCctttgtttaaaagaaaaaaaagagagagatagagagagaaagaacgatTGGTTGCTTATTgttcaaccaaaaaaaaaaaaaaaaaaataaagaaaataaaattcagCAGTGTTCTTggttatgatttatttttggaaagtaaaggacaaaaaataaatactttgtaattttgtttCCCTGTACTGCAGTTGTAAGTTGAGTTGCCAGATATGAACCGAAACTACACAGCAGTGGCGTTCTGACCATTGTTTAGACAGGTAGAGACACAGAGAAGCAAGGTTTTTAGGTTTTCGCCAAACCTGTCACTGTTCCAAACCGGCAGGTGACGCTATCTGCTTTTTTTCGCCAACTGCTGTCTTTCTGGTGCTGGcatatttttgtgtatatagCTGAGCTGAACTTCGTATGGCCAATGTCTCGCAGAGTATGCAGTAGCATGTGTGGCCACAGGAGGGTAGCATTTATCTGTTATAGACCTTTATCTATTACATCCCTCACTTCGGACAAAAGAGCCAATGGCTGTGCCCTGCCACATGGAGCTTTATAGAAACTTGCTCAAAAACCCCTCTGAAAAAAGCTTAATTCGCTTAATTCAGTGTATTAATGTACAGTATCATTGCAGGCAGTGCATTTGAACAATGTACAAAACAAGGAAACCATCCAGTTAAAATCCATGCAGAtaaggatttaaaaaataataataaaagtaaagattccatttttttttctacttggCAGGGAATCGACATTCTCCCTTAGTGGGTGTACTTACTGATGGCGTTCTCATTTTCTCGCTATGTTTTCATCTGCATTCAAAACTAGACAGAATGTAGCCTTCTCCTTTGCTGGCCTGCTGACGCCTGCTATGTGTTGTGTCTGTACTGCCATGCTGTTAGTGCCATGCTGTAAACTGTCTGGTACCCTCTTAAGACAGGGCTGTAGACCTAACAATTACTACCCTTATCTGCATATgtactgtattgttttatttctctggatttattattttttgtgagaGTTGTCTGCattttaactaattaaattaTGGGAATTAAAATTACAAAGAATAACA

Function

GO:

id name namespace
GO:0006817 phosphate ion transport biological_process
GO:0016020 membrane cellular_component
GO:0005315 inorganic phosphate transmembrane transporter activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU68289 lncRNA upstream 7535 8102075 ~ 8102287 (+) True G50550
TU68263 lncRNA upstream 63769 8045701 ~ 8046053 (+) True G50535
TU68123 lncRNA upstream 167074 7939969 ~ 7942748 (+) False G50439
TU68124 lncRNA upstream 167295 7939601 ~ 7942527 (+) True G50439
TU68105 lncRNA upstream 225764 7880886 ~ 7884058 (+) False c6h9orf3
TU68308 lncRNA downstream 25654 8202437 ~ 8203419 (+) True G50565
TU68332 lncRNA downstream 125733 8302516 ~ 8302910 (+) True G50580
TU68418 lncRNA downstream 578862 8755645 ~ 8756009 (+) True G50656
TU68536 lncRNA downstream 768490 8945273 ~ 8946372 (+) True G50770
XR_002650140.1 lncRNA downstream 828209 9004992 ~ 9006646 (+) True LOC107197475
XM_007231600.3 mRNA upstream 39016 8051690 ~ 8070806 (+) True ercc6l2
XM_022671090.1 mRNA upstream 226011 7730684 ~ 7883811 (+) True c6h9orf3
XM_007231854.3 mRNA upstream 390829 7618199 ~ 7718993 (+) True dock8
XM_007231609.2 mRNA downstream 67099 8243882 ~ 8244724 (+) True LOC103033636
XM_007231610.3 mRNA downstream 77785 8254568 ~ 8257952 (+) True LOC103034161
XM_007231613.2 mRNA downstream 82820 8259603 ~ 8262730 (+) True LOC103035131
XM_007231611.3 mRNA downstream 87381 8264164 ~ 8269334 (+) True LOC103034488
XM_022671109.1 mRNA downstream 799435 8976218 ~ 8995752 (+) True hsd17b4
trnae-cuc other upstream 1125561 6984190 ~ 6984261 (+) True trnae-cuc
TU67633 other upstream 1733117 6371520 ~ 6376705 (+) True G50063
TU67445 other upstream 2321089 5777052 ~ 5788733 (+) True LOC103023397
TU67370 other upstream 2482370 5619159 ~ 5627452 (+) True prok1
TU66895 other upstream 3863595 4244528 ~ 4246227 (+) True G49475
TU68311 other downstream 30559 8207342 ~ 8221162 (+) True G50568
TU68306 other downstream 93465 8270248 ~ 8278756 (+) True G50563
TU68335 other downstream 166157 8342940 ~ 8344514 (+) True G50583
TU68705 other downstream 1466591 9643374 ~ 9782721 (+) True G50889
XR_002650141.1 other downstream 1946937 10123720 ~ 10130801 (+) False nfu1

Expression Profile