RNA id: XM_007231678.3


Basic Information

Item Value
RNA id XM_007231678.3
length 3007
RNA type mRNA
GC content 0.45
exon number 8
gene id adipor1
representative True

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 2465593 ~ 2474573 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

ACCTGTGCAACTGGATTCTCGGATCGGAGCCTCGGACTGGAGCTGTATCTGTAGTAGAGTAGATAGccacgttagctagctaaataacaGCTTACAAGCTGAATATCACAGTTTTGAGAAAGAtagtaagatagatagatagctgaACTTATTGGTAAGCCTTAGATTCAGCTGAAAGaagcattttaaacatacattttattgtttttacttcTGAAATCGACATAGAGCAGCTCCACTTCCTCAACACTGCGCAGAGAGGCAAGCTAAGGACAGGTAGCTTAGCTTATGCTCAAGTTTACGGCTTTATTTCGCAGGAATTGCCGCTAAAACCTGGTTCGTCCAGCTGTCAAACACCTTAAACAGGAGTTCAGGACTTTGACTGTGATCTGAGGGGCAAGGCGGGGCCTGTGGGGAGCTGTAGGTTCTCCCCATGACATCGCGGCATCATGCCAACAGCGGCTCCACCAGCGATGCCGAGTGGCGGGTTTCTGAGGAGGACGAGGGGGACGTGGAGCTCGCTGAGCTGGGGCCGTTGCTGACCGCTCCTGAGTCTGAACccaggGGTGCAAGAGCATTCCCAGATAcagatggtgatgatggtgatgatgacagTGATGATAATGGAGAGAACTGTGGCCTGCGGGTCGTCACACTGCCCCTGCAGGCTCACCATGCCATGGAGAAGATGGAGGAGTTTGTGCACAAGGTGTGGGAGGGGCGTTGGCGAGTGATCCCGTACCAGCTGCttcctgattggctgaaagaTAACGACTATCTGCTTCACGGCCACCGGCCGCCCATGCCATCATTCAGAGCCTGCTTCGGGAGCATCTTCAGGATCCACACTGAAACAGGGAACATCTGGTCACATATGCTTGGTCTGATTTTGTTCCTGTTTCTGGGCACCCTGACCATGCTGCGGCCCAACGTGTCCTTCATGGCTCCTCTGCAGGAGAAGGTGGTGTTTGGGATGTTTTTCCTGGGTGCGGTGCTCTGTCTCTGCTTCTCCTGGCTCTTCCACACAGTCTACTGCCACTCGGAGAAAGTCTCCAGAACGTTCTCAAAgttggATTACTCTGGAATAGCGTTGCTGATAATGGGCTCGTTTGTTCCGTGGCTCTATTACTCCTTCTACTGTTCCCCACAACCACGGCTCATCTACCtctctgtggtgtgtgtgttgggcatCTCTGCCATTATTGTGGCACAGTGGGACCGTTTCGCCACGCCGCGCCACCGGCCTACACgtgcagGTGTGTTTCTTGGCCTGGGGCTGAGCGGCGTCATTCCCACAATGCACTTCACCATCGCTGAGGGCTTTGTGAAGGCCACCACAGTGGGCCAGATGGGCTGGTTCATCCTGATGGGCGCCATGTACATAACTGGAGCTGGACTCTACGCTGCACGCATCCCTGAACGCTTCTTCCCTGGCAAATGTGACATCTGGTTTCAATCCCATCAGATATTCCATGTACTGGTTGTGGCTGCAGCATTCATCCACTTCTACGGCATCTCCAACCTGCAGGAGTTCCGCTACGGTCTGGGAGGCGGCTGCACCGACGATTCCCTGCTCTAAAATAACTCCGTTCCCCTGTCTCCTCGATCCAGCTGTGGCTCCCCTGAATCAGCCACAGCTGGGAAAGAGCCATCGACCACCAGACCAGCCGCCGACCACACACTGAACCATGATCAAATATTAATTCTTTTAAATTATTCTAGTGAATAAGTTATAAAGTTTGTAAAGTGATTTACAGAGTATTTAAGCCCTTTCACACTTTTTCAcgcatttttttttggtcagacgCGAATAACAAAACTCCACAGCTCTTGATAAATGTCCAcgatttctgtttctctgctcctTGTCCACTTTTGCATAATTAACTCCTCCACACAAGTGCTCATTAACGAGGGGAGCATTTAGTAAAGTTCTCTTCTTTTGTAgacttaaaaatactttttaaactttaaattactCCTCCTGTAATGTGTGTAAATTGTCTGTAAAGATCTCGCCATCATTCCCCAGCCTTTCATCTTCAAACCACCACATCGATCGAGTATAagattctatttttttctgattttgatttgatttatttagtgCTCAGCATCACAGTCAGTCAATTTCTGACATCATTATTATCtgtgtattcattttaaaacctTGTCATTTACCTGTAAAAATTAGACTGTGTGTGAAAGGGCCTTTACAGAACATAATTACTTGAAAATTGTGATTTATAAAAAATCTCAGAACTCAGTTAAATGAGAAATCTTGtataaaatggacttgggttgtagtgaaacatgatgacgagtacaaacttttgttgaatagccctccTCCGTCCACCACCAGTATttaaaatacagcgcttttagccaaTTCTCCCAAAGGGCTTACAATGCTAATGACGGGGGCATAGAGTAACCCATACAAAAAAATGGtcatttttacactattaacaagctgaaagtagctccacatttcATTGCTAGAATTCTGAGgatcctgatatttaaaacgaggcactgagagaTTTAAAAGTGCaaagatagtttattaaaaacactgtttatacaaacAGTACCTCAATAAGTCGACTTATGAGATGAAGCGAATGGATAGGACAGATGAACAGATAATTTGAGGTAAATTGAGGGCTTTTAGTGTAGTTATGCTTCTTCATGGAACATAGAAGACTCAGACGCTCCTAgacttaaaaatactttttaaatgtaaaatgactACTCCATAAAGTGTCTGTCAAAATTTCTCGTCATAATTCCCCAGCCTTTCGGCTCCAAACCGCCACATACTTACACATACTTACTTCtgattctgatatttttttatttagtgctcACCATCACAGTCAGTCAGtttcagtcattttttaaaacttgacATTTACTTGTAAAAATCAAACTGTGTGTGAATGAGGCTTTACAGAACATGATTACTTAAAAATTGTGATTCATAAAAAATGTCAGAGCTCAG

Function

GO:

id name namespace
GO:0033211 adiponectin-activated signaling pathway biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0042562 hormone binding molecular_function

KEGG:

id description
K07297 ADIPOR; adiponectin receptor

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU66401 lncRNA upstream 35950 2428120 ~ 2429643 (+) True G49117
TU66409 lncRNA upstream 37682 2426273 ~ 2427911 (+) True G49122
TU66406 lncRNA upstream 39425 2425130 ~ 2426168 (+) False G49122
TU66405 lncRNA upstream 60865 2404515 ~ 2404728 (+) True G49121
TU66404 lncRNA upstream 62616 2402683 ~ 2402977 (+) True G49120
TU66451 lncRNA downstream 182623 2657196 ~ 3150588 (+) True G49146
TU66455 lncRNA downstream 196244 2670817 ~ 2672813 (+) True G49150
TU66456 lncRNA downstream 206625 2681198 ~ 2681503 (+) True G49151
TU66460 lncRNA downstream 232450 2707023 ~ 2708224 (+) True G49154
TU66461 lncRNA downstream 232450 2707023 ~ 2709154 (+) False G49154
XM_007231679.3 mRNA upstream 103369 2359922 ~ 2362224 (+) True LOC103028158
XM_007231153.2 mRNA upstream 464423 1999574 ~ 2001170 (+) True LOC103045867
XM_022670945.1 mRNA upstream 679231 1772919 ~ 1786362 (+) True LOC103027674
XM_015603140.2 mRNA upstream 701518 1760812 ~ 1764075 (+) True pym1
XM_022670987.1 mRNA upstream 1003895 1415274 ~ 1461698 (+) True LOC103041629
XM_022671014.1 mRNA downstream 4018 2478591 ~ 2506196 (+) True klhl12
XM_015600865.2 mRNA downstream 35571 2510144 ~ 2521419 (+) True LOC103031418
XM_015600866.2 mRNA downstream 35571 2510144 ~ 2521419 (+) False LOC103031418
XM_015600864.2 mRNA downstream 52896 2527469 ~ 2583319 (+) False LOC103026437
XM_007231675.3 mRNA downstream 52897 2527470 ~ 2583319 (+) True LOC103026437
TU65829 other upstream 1654328 808155 ~ 811265 (+) True G48714
TU66507 other downstream 508273 2982846 ~ 3013630 (+) False faf1
TU66505 other downstream 508351 2982924 ~ 3013630 (+) False faf1
TU66506 other downstream 508351 2982924 ~ 3013630 (+) False faf1
TU66895 other downstream 1769955 4244528 ~ 4246227 (+) True G49475
TU67370 other downstream 3144586 5619159 ~ 5627452 (+) True prok1

Expression Profile