Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_002650073.1 |
| length | 270 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 4 |
| gene id | LOC111192670 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035902.1 |
| NCBI id | CM008305.1 |
| chromosome length | 52532229 |
| location | 32710963 ~ 32713543 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0007155 | cell adhesion | biological_process |
| GO:0005540 | hyaluronic acid binding | molecular_function |
| GO:0030246 | carbohydrate binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU75497 | lncRNA | upstream | 217543 | 32489901 ~ 32493420 (+) | True | G55995 |
| TU75477 | lncRNA | upstream | 240753 | 32449498 ~ 32470210 (+) | True | G55979 |
| TU75489 | lncRNA | upstream | 244523 | 32463588 ~ 32466440 (+) | True | G55988 |
| TU75476 | lncRNA | upstream | 262174 | 32447672 ~ 32448789 (+) | True | G55978 |
| TU75475 | lncRNA | upstream | 264160 | 32444733 ~ 32446803 (+) | True | G55977 |
| TU75550 | lncRNA | downstream | 101465 | 32815008 ~ 32815843 (+) | True | G56040 |
| TU75586 | lncRNA | downstream | 436375 | 33149918 ~ 33177607 (+) | True | G56075 |
| TU75699 | lncRNA | downstream | 506983 | 33220526 ~ 33226416 (+) | True | G56147 |
| TU75719 | lncRNA | downstream | 635672 | 33349215 ~ 33349630 (+) | True | G56159 |
| TU75774 | lncRNA | downstream | 748867 | 33462410 ~ 33466117 (+) | True | G56201 |
| XM_007229366.3 | mRNA | upstream | 270952 | 32417679 ~ 32440011 (+) | True | rflna |
| XM_022670517.1 | mRNA | upstream | 459954 | 32244560 ~ 32251009 (+) | True | LOC103025291 |
| XM_007229351.3 | mRNA | upstream | 468404 | 32221177 ~ 32242559 (+) | True | LOC103022464 |
| XM_022670917.1 | mRNA | downstream | 6 | 32713549 ~ 32729908 (+) | True | LOC111192715 |
| XM_022670521.1 | mRNA | downstream | 615243 | 33328786 ~ 33360143 (+) | True | LOC103026160 |
| XM_007237390.3 | mRNA | downstream | 662476 | 33376019 ~ 33378613 (+) | True | LOC103024594 |
| XM_007234214.3 | mRNA | downstream | 790072 | 33503615 ~ 33509374 (+) | True | gck |
| XM_007234212.3 | mRNA | downstream | 797968 | 33511511 ~ 33520503 (+) | True | LOC103039216 |
| TU75290 | other | upstream | 733544 | 31974681 ~ 31977419 (+) | True | G55844 |
| TU75269 | other | upstream | 786868 | 31920820 ~ 31924095 (+) | True | G55831 |
| TU74844 | other | upstream | 2085917 | 30621926 ~ 30625046 (+) | True | G55502 |
| TU74882 | other | upstream | 2160902 | 30528862 ~ 30550061 (+) | True | G55532 |
| TU74460 | other | upstream | 3956146 | 28754030 ~ 28754817 (+) | True | G55218 |
| TU75720 | other | downstream | 644671 | 33358214 ~ 33366012 (+) | True | G56160 |
| TU75764 | other | downstream | 691031 | 33404574 ~ 33406650 (+) | True | G56193 |
| TU75802 | other | downstream | 851285 | 33564828 ~ 33581368 (+) | False | izumo1 |
| TU75801 | other | downstream | 864168 | 33577711 ~ 33581368 (+) | False | izumo1 |
| TU75803 | other | downstream | 865163 | 33578706 ~ 33581368 (+) | False | izumo1 |
