Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_002650077.1 |
| length | 258 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 3 |
| gene id | LOC111192672 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035902.1 |
| NCBI id | CM008305.1 |
| chromosome length | 52532229 |
| location | 34465320 ~ 34477898 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | description |
|---|---|
| ko03440 | Homologous recombination |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU75912 | lncRNA | upstream | 679659 | 33785383 ~ 33785661 (+) | True | G56305 |
| TU75886 | lncRNA | upstream | 708628 | 33750902 ~ 33756692 (+) | True | G56289 |
| TU75888 | lncRNA | upstream | 708628 | 33750902 ~ 33756692 (+) | False | G56289 |
| TU75889 | lncRNA | upstream | 708628 | 33750902 ~ 33756692 (+) | False | G56289 |
| TU75877 | lncRNA | upstream | 738181 | 33726918 ~ 33727139 (+) | True | G56283 |
| TU75984 | lncRNA | downstream | 67789 | 34545687 ~ 34545937 (+) | True | G56364 |
| TU75987 | lncRNA | downstream | 106274 | 34584172 ~ 34586827 (+) | True | G56367 |
| TU75993 | lncRNA | downstream | 123555 | 34601453 ~ 34603978 (+) | True | G56368 |
| TU75995 | lncRNA | downstream | 130736 | 34608634 ~ 34617113 (+) | True | G56370 |
| TU76051 | lncRNA | downstream | 229598 | 34707496 ~ 34711475 (+) | True | G56411 |
| XM_015600794.2 | mRNA | upstream | 33485 | 34409348 ~ 34431835 (+) | True | LOC103026546 |
| XM_015600798.2 | mRNA | upstream | 87395 | 34346593 ~ 34377925 (+) | True | nr6a1 |
| XM_007234208.2 | mRNA | upstream | 825243 | 33635152 ~ 33640077 (+) | True | LOC103037863 |
| XM_007234209.3 | mRNA | upstream | 840568 | 33619314 ~ 33624752 (+) | True | LOC103038175 |
| XM_022670920.1 | mRNA | upstream | 869502 | 33578593 ~ 33595818 (+) | True | izumo1 |
| XM_007231496.3 | mRNA | downstream | 25216 | 34503114 ~ 34511684 (+) | True | fgf17 |
| XM_015600796.2 | mRNA | downstream | 26820 | 34504718 ~ 34511684 (+) | False | fgf17 |
| XM_022670526.1 | mRNA | downstream | 28200 | 34506098 ~ 34511684 (+) | False | fgf17 |
| XM_022670527.1 | mRNA | downstream | 28200 | 34506098 ~ 34511684 (+) | False | fgf17 |
| XM_007231493.3 | mRNA | downstream | 52402 | 34530300 ~ 34533334 (+) | True | LOC103024866 |
| TU75802 | other | upstream | 883952 | 33564828 ~ 33581368 (+) | False | izumo1 |
| TU75801 | other | upstream | 883952 | 33577711 ~ 33581368 (+) | False | izumo1 |
| TU75803 | other | upstream | 883952 | 33578706 ~ 33581368 (+) | False | izumo1 |
| TU75764 | other | upstream | 1058670 | 33404574 ~ 33406650 (+) | True | G56193 |
| TU75720 | other | upstream | 1099308 | 33358214 ~ 33366012 (+) | True | G56160 |
| TU75961 | other | downstream | 27557 | 34505455 ~ 34511642 (+) | False | fgf17 |
| TU76054 | other | downstream | 235320 | 34713218 ~ 34751563 (+) | True | G56414 |
| TU76153 | other | downstream | 748598 | 35226496 ~ 35239100 (+) | False | ikbkb |
| TU76213 | other | downstream | 942889 | 35420787 ~ 35424473 (+) | True | G56504 |
| TU76490 | other | downstream | 1478206 | 35956104 ~ 35963319 (+) | False | G56701 |
