Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00012056 |
| length | 753 |
| lncRNA type | retained_intron |
| GC content | 0.35 |
| exon number | 3 |
| gene id | XLOC_006118 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007124.7 |
| NCBI id | CM002897.2 |
| chromosome length | 52186027 |
| location | 33246150 ~ 33251757 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006120 | mitochondrial electron transport, NADH to ubiquinone | biological_process |
| GO:0032981 | mitochondrial respiratory chain complex I assembly | biological_process |
| GO:0010257 | NADH dehydrogenase complex assembly | biological_process |
| GO:0005739 | mitochondrion | cellular_component |
| GO:0051082 | unfolded protein binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-050306-9 | Predicted to enable unfolded protein binding activity. Predicted to be involved in mitochondrial electron transport, NADH to ubiquinone and mitochondrial respiratory chain complex I assembly. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 11. Orthologous to human NDUFAF1 (NADH:ubiquinone oxidoreductase complex assembly factor 1). |
| ensembl_id | ENSDART00000147538 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00013409 | lncRNA | upstream | 140984 | 33104911 ~ 33105228 (+) | True | XLOC_006116 |
| TCONS_00013634 | lncRNA | upstream | 329286 | 32906643 ~ 32916926 (+) | True | XLOC_006112 |
| TCONS_00013408 | lncRNA | upstream | 1137740 | 32105265 ~ 32108472 (+) | True | XLOC_006103 |
| TCONS_00013633 | lncRNA | upstream | 1267728 | 31955220 ~ 31978484 (+) | True | XLOC_006102 |
| TCONS_00013630 | lncRNA | upstream | 1395704 | 31806781 ~ 31850508 (+) | False | XLOC_006101 |
| TCONS_00013635 | lncRNA | downstream | 467701 | 33715276 ~ 33968528 (+) | True | XLOC_006132 |
| TCONS_00012079 | lncRNA | downstream | 1448151 | 34695726 ~ 34698270 (+) | True | XLOC_006134 |
| TCONS_00013636 | lncRNA | downstream | 1504599 | 34752174 ~ 34753090 (+) | False | XLOC_006135 |
| TCONS_00013410 | lncRNA | downstream | 1504599 | 34752174 ~ 34772595 (+) | False | XLOC_006135 |
| TCONS_00013637 | lncRNA | downstream | 1504599 | 34752174 ~ 34797693 (+) | False | XLOC_006135 |
| TCONS_00012048 | mRNA | upstream | 122972 | 33117528 ~ 33123240 (+) | True | XLOC_006117 |
| TCONS_00012047 | mRNA | upstream | 180382 | 33055548 ~ 33065830 (+) | True | XLOC_006115 |
| TCONS_00012046 | mRNA | upstream | 211838 | 33024547 ~ 33034374 (+) | True | XLOC_006114 |
| TCONS_00012043 | mRNA | upstream | 433309 | 32807419 ~ 32812903 (+) | True | XLOC_006110 |
| TCONS_00012042 | mRNA | upstream | 450183 | 32740509 ~ 32796029 (+) | True | XLOC_006109 |
| TCONS_00012057 | mRNA | downstream | 9272 | 33256847 ~ 33259799 (+) | True | XLOC_006119 |
| TCONS_00012058 | mRNA | downstream | 21082 | 33268657 ~ 33281310 (+) | True | XLOC_006120 |
| TCONS_00012059 | mRNA | downstream | 34520 | 33282095 ~ 33293654 (+) | True | XLOC_006121 |
| TCONS_00012060 | mRNA | downstream | 50763 | 33298338 ~ 33301986 (+) | False | XLOC_006122 |
| TCONS_00012061 | mRNA | downstream | 50821 | 33298396 ~ 33300914 (+) | True | XLOC_006122 |
| TCONS_00012045 | other | upstream | 261443 | 32984654 ~ 32984769 (+) | True | XLOC_006113 |
| TCONS_00012044 | other | upstream | 399603 | 32846493 ~ 32846609 (+) | True | XLOC_006111 |
| TCONS_00012037 | other | upstream | 853713 | 32392383 ~ 32392499 (+) | True | XLOC_006105 |
| TCONS_00012034 | other | upstream | 1468686 | 31769821 ~ 31777526 (+) | True | XLOC_006100 |
| TCONS_00011984 | other | upstream | 2409436 | 30836656 ~ 30836776 (+) | True | XLOC_006071 |
| TCONS_00012076 | other | downstream | 1178673 | 34426248 ~ 34426365 (+) | True | XLOC_006133 |
| TCONS_00012081 | other | downstream | 1635671 | 34883246 ~ 34883370 (+) | True | XLOC_006136 |
| TCONS_00012082 | other | downstream | 1721944 | 34969519 ~ 34969645 (+) | True | XLOC_006137 |
| TCONS_00012108 | other | downstream | 3344619 | 36592194 ~ 36606932 (+) | False | XLOC_006151 |
| TCONS_00012134 | other | downstream | 4426603 | 37674178 ~ 37674294 (+) | True | XLOC_006162 |
