RNA id: TCONS_00012103


Basic Information

Item Value
RNA id TCONS_00012103
length 543
RNA type mRNA
GC content 0.51
exon number 5
gene id XLOC_006150
representative False

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 36144341 ~ 36153572 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATGCATGTAGCATGTATCGGCTCGATGGTAAAGCCCCAAAACGAGCCCGCGGAGCTGGTCAAACGAGCCCTGGATTTTAAAACGCAGGGCACACAGTGCTACAAGGACAAAAAATACCGCGAGGCCATCGGCAAGTACCACCGCGCGCTGCTGGAAATGAAGGGTCTGTGTCGCTCTCCGTCCACCGTCCTGACTGCCATCAGTAAATCCAGTCTGACGGACGAGCAGAAAGGCGCGGTGGAGAACGCGGAGCTGGAGTGCTACAACAGTCTGGCAGCTTGTTTGTTGCAGATGGAGCTGGTGAATTATGAACGAGTGAAAGAGTACTGTCTGAAGGTTTTGAGAAAGGAGGGCGAGAATTTTAAAGCTCTGTATCGCTCTGGTGTGGCGTATTATCATCTGGGAGACTTCAACAAAGCCCTGCACTACCTGAAGGAGTCACACAAGCAACAGCCCACAGACACAAACGTCATCCGTTACATCCAGCTCACGGAAATGAAAATCCGACGAAATGCCCAGAGAGAGAAAACAGAAGttccataa

Function

GO: NA

KEGG:

id description
ko04990 Domain-containing proteins not elsewhere classified

Ensembl:

ensembl_id ENSDART00000182930

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00013642 lncRNA upstream 149174 35989155 ~ 35995167 (+) False XLOC_006149
TCONS_00013643 lncRNA upstream 149174 35989756 ~ 35995167 (+) False XLOC_006149
TCONS_00013644 lncRNA upstream 149174 35990231 ~ 35995167 (+) False XLOC_006149
TCONS_00013645 lncRNA upstream 149174 35990357 ~ 35995167 (+) True XLOC_006149
TCONS_00012086 lncRNA upstream 622165 35483618 ~ 35522176 (+) True XLOC_006140
TCONS_00012107 lncRNA downstream 434434 36585616 ~ 36592453 (+) False XLOC_006151
TCONS_00013646 lncRNA downstream 434434 36585616 ~ 36606932 (+) False XLOC_006151
TCONS_00012110 lncRNA downstream 444458 36595640 ~ 36599022 (+) True XLOC_006151
TCONS_00012126 lncRNA downstream 904388 37055570 ~ 37063334 (+) False XLOC_006158
TCONS_00012127 lncRNA downstream 913966 37065148 ~ 37067489 (+) True XLOC_006158
TCONS_00012102 mRNA upstream 182906 35955562 ~ 35961435 (+) True XLOC_006148
TCONS_00012101 mRNA upstream 190745 35925490 ~ 35953596 (+) True XLOC_006147
TCONS_00012100 mRNA upstream 271745 35856499 ~ 35872596 (+) True XLOC_006146
TCONS_00012099 mRNA upstream 282145 35856463 ~ 35862196 (+) False XLOC_006146
TCONS_00012097 mRNA upstream 356124 35765317 ~ 35788217 (+) False XLOC_006145
TCONS_00012106 mRNA downstream 434217 36585399 ~ 36593618 (+) False XLOC_006151
TCONS_00012109 mRNA downstream 444436 36595618 ~ 36606941 (+) False XLOC_006151
TCONS_00012111 mRNA downstream 462177 36613359 ~ 36625554 (+) False XLOC_006152
TCONS_00012112 mRNA downstream 470918 36622100 ~ 36626092 (+) True XLOC_006152
TCONS_00012113 mRNA downstream 482173 36633355 ~ 36638969 (+) True XLOC_006153
TCONS_00012082 other upstream 1174696 34969519 ~ 34969645 (+) True XLOC_006137
TCONS_00012081 other upstream 1260971 34883246 ~ 34883370 (+) True XLOC_006136
TCONS_00012076 other upstream 1717976 34426248 ~ 34426365 (+) True XLOC_006133
TCONS_00012045 other upstream 3159572 32984654 ~ 32984769 (+) True XLOC_006113
TCONS_00012044 other upstream 3297732 32846493 ~ 32846609 (+) True XLOC_006111
TCONS_00012108 other downstream 441012 36592194 ~ 36606932 (+) False XLOC_006151
TCONS_00012134 other downstream 1522996 37674178 ~ 37674294 (+) True XLOC_006162
TCONS_00012135 other downstream 1999335 38150517 ~ 38150637 (+) True XLOC_006163
TCONS_00012137 other downstream 2074975 38226157 ~ 38277981 (+) False XLOC_006165
TCONS_00012159 other downstream 3818167 39969349 ~ 39969465 (+) True XLOC_006177

Expression Profile

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