Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00013770 |
| length | 1506 |
| lncRNA type | antisense_over |
| GC content | 0.42 |
| exon number | 2 |
| gene id | XLOC_006538 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007124.7 |
| NCBI id | CM002897.2 |
| chromosome length | 52186027 |
| location | 16868380 ~ 16879070 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0030672 | synaptic vesicle membrane | cellular_component |
| GO:0044421 | obsolete extracellular region part | cellular_component |
| GO:0031012 | extracellular matrix | cellular_component |
| GO:0062023 | collagen-containing extracellular matrix | cellular_component |
| GO:0005576 | extracellular region | cellular_component |
| GO:0099501 | exocytic vesicle membrane | cellular_component |
| GO:0005615 | extracellular space | cellular_component |
| GO:0005201 | extracellular matrix structural constituent | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00013769 | lncRNA | downstream | 606807 | 16260651 ~ 16261573 (-) | True | XLOC_006536 |
| TCONS_00012638 | lncRNA | downstream | 1171389 | 15685493 ~ 15696991 (-) | True | XLOC_006527 |
| TCONS_00012632 | lncRNA | downstream | 1288228 | 15575137 ~ 15580152 (-) | False | XLOC_006526 |
| TCONS_00013470 | lncRNA | downstream | 1290335 | 15575712 ~ 15578045 (-) | True | XLOC_006526 |
| TCONS_00013469 | lncRNA | downstream | 1410756 | 15456676 ~ 15457624 (-) | True | XLOC_006525 |
| TCONS_00013771 | lncRNA | upstream | 615227 | 17494297 ~ 17530435 (-) | False | XLOC_006540 |
| TCONS_00013772 | lncRNA | upstream | 641935 | 17521005 ~ 17526496 (-) | False | XLOC_006540 |
| TCONS_00013773 | lncRNA | upstream | 641935 | 17521005 ~ 17530405 (-) | False | XLOC_006540 |
| TCONS_00013774 | lncRNA | upstream | 641935 | 17521005 ~ 17530536 (-) | True | XLOC_006540 |
| TCONS_00013471 | lncRNA | upstream | 807414 | 17686484 ~ 17690664 (-) | False | XLOC_006541 |
| TCONS_00012657 | mRNA | downstream | 610532 | 16230556 ~ 16257848 (-) | True | XLOC_006535 |
| TCONS_00012656 | mRNA | downstream | 642068 | 16219082 ~ 16226312 (-) | True | XLOC_006534 |
| TCONS_00012655 | mRNA | downstream | 645992 | 16219082 ~ 16222388 (-) | False | XLOC_006534 |
| TCONS_00012654 | mRNA | downstream | 676706 | 16150654 ~ 16191674 (-) | True | XLOC_006533 |
| TCONS_00012653 | mRNA | downstream | 801383 | 16027559 ~ 16066997 (-) | True | XLOC_006532 |
| TCONS_00012659 | mRNA | upstream | 43635 | 16922705 ~ 17464362 (-) | False | XLOC_006539 |
| TCONS_00012660 | mRNA | upstream | 486822 | 17365892 ~ 17464654 (-) | True | XLOC_006539 |
| TCONS_00012661 | mRNA | upstream | 835226 | 17714296 ~ 17729474 (-) | False | XLOC_006542 |
| TCONS_00012662 | mRNA | upstream | 835376 | 17714446 ~ 17723417 (-) | True | XLOC_006542 |
| TCONS_00012663 | mRNA | upstream | 872796 | 17751866 ~ 17860435 (-) | False | XLOC_006543 |
| TCONS_00012658 | other | downstream | 560497 | 16307767 ~ 16307883 (-) | True | XLOC_006537 |
| TCONS_00012624 | other | downstream | 2483842 | 14384421 ~ 14384538 (-) | True | XLOC_006518 |
| TCONS_00012619 | other | downstream | 3197843 | 13670440 ~ 13670537 (-) | True | XLOC_006513 |
| TCONS_00012616 | other | downstream | 3223818 | 13644445 ~ 13644562 (-) | True | XLOC_006511 |
| TCONS_00012615 | other | downstream | 3277810 | 13587296 ~ 13590570 (-) | True | XLOC_006510 |
| TCONS_00012667 | other | upstream | 895587 | 17774657 ~ 17860347 (-) | False | XLOC_006543 |
| TCONS_00012681 | other | upstream | 1765820 | 18644890 ~ 18645005 (-) | True | XLOC_006551 |
| TCONS_00012682 | other | upstream | 1770422 | 18649492 ~ 18649682 (-) | True | XLOC_006552 |
| TCONS_00012685 | other | upstream | 1836240 | 18715310 ~ 18715426 (-) | True | XLOC_006554 |
| TCONS_00012693 | other | upstream | 3338420 | 20217490 ~ 20222092 (-) | False | XLOC_006562 |
