Item | Value |
---|---|
RNA id | TCONS_00012745 |
length | 604 |
RNA type | mRNA |
GC content | 0.40 |
exon number | 5 |
gene id | XLOC_006598 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_007124.7 |
NCBI id | CM002897.2 |
chromosome length | 52186027 |
location | 23488282 ~ 23612369 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
species | zebrafish (Danio rerio) |
id | name | namespace |
---|---|---|
GO:0006260 | DNA replication | biological_process |
GO:0006269 | DNA replication, synthesis of RNA primer | biological_process |
GO:1990077 | primosome complex | cellular_component |
GO:0005658 | alpha DNA polymerase | cellular_component |
GO:0046872 | metal ion binding | molecular_function |
GO:0003677 | DNA binding | molecular_function |
GO:0051536 | iron-sulfur cluster binding | molecular_function |
GO:0051539 | 4 iron, 4 sulfur cluster binding | molecular_function |
id | description |
---|---|
ZDB-GENE-050522-471 | Predicted to enable 4 iron, 4 sulfur cluster binding activity; DNA binding activity; and metal ion binding activity. Predicted to act upstream of or within DNA replication, synthesis of RNA primer. Predicted to be part of alpha DNA polymerase:primase complex. Orthologous to human PRIM2 (DNA primase subunit 2). |
ensembl_id | ENSDART00000146216 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TCONS_00013784 | lncRNA | downstream | 195062 | 23408029 ~ 23411631 (-) | False | XLOC_006597 |
TCONS_00013785 | lncRNA | downstream | 196134 | 23408669 ~ 23410559 (-) | True | XLOC_006597 |
TCONS_00013783 | lncRNA | downstream | 388875 | 23212759 ~ 23217818 (-) | False | XLOC_006595 |
TCONS_00013782 | lncRNA | downstream | 388875 | 23212759 ~ 23217818 (-) | True | XLOC_006595 |
TCONS_00013781 | lncRNA | downstream | 389059 | 23212759 ~ 23217634 (-) | False | XLOC_006595 |
TCONS_00013481 | lncRNA | upstream | 735029 | 24346989 ~ 24351543 (-) | True | XLOC_006611 |
TCONS_00013786 | lncRNA | upstream | 961126 | 24573086 ~ 24574746 (-) | True | XLOC_006616 |
TCONS_00013787 | lncRNA | upstream | 965305 | 24577265 ~ 24578022 (-) | True | XLOC_006617 |
TCONS_00012770 | lncRNA | upstream | 973264 | 24585224 ~ 24588220 (-) | True | XLOC_006618 |
TCONS_00013788 | lncRNA | upstream | 978460 | 24590420 ~ 24623225 (-) | True | XLOC_006619 |
TCONS_00012740 | mRNA | downstream | 336117 | 23233956 ~ 23270576 (-) | False | XLOC_006596 |
TCONS_00012741 | mRNA | downstream | 341969 | 23234904 ~ 23264724 (-) | True | XLOC_006596 |
TCONS_00012739 | mRNA | downstream | 511687 | 23083858 ~ 23095006 (-) | True | XLOC_006594 |
TCONS_00012737 | mRNA | downstream | 532239 | 23070581 ~ 23074454 (-) | False | XLOC_006593 |
TCONS_00012738 | mRNA | downstream | 532455 | 23072376 ~ 23074238 (-) | True | XLOC_006593 |
TCONS_00012746 | mRNA | upstream | 22857 | 23634817 ~ 23665580 (-) | False | XLOC_006599 |
TCONS_00012748 | mRNA | upstream | 23088 | 23635048 ~ 23666579 (-) | False | XLOC_006599 |
TCONS_00012747 | mRNA | upstream | 23088 | 23635048 ~ 23666579 (-) | True | XLOC_006599 |
TCONS_00012749 | mRNA | upstream | 116216 | 23728176 ~ 23756700 (-) | True | XLOC_006600 |
TCONS_00012750 | mRNA | upstream | 307520 | 23919480 ~ 23956178 (-) | False | XLOC_006601 |
TCONS_00012744 | other | downstream | 92890 | 23488297 ~ 23513803 (-) | False | XLOC_006598 |
TCONS_00012725 | other | downstream | 748238 | 22856335 ~ 22858455 (-) | True | XLOC_006586 |
TCONS_00012723 | other | downstream | 759209 | 22843881 ~ 22847484 (-) | True | XLOC_006585 |
TCONS_00012722 | other | downstream | 762011 | 22843830 ~ 22844682 (-) | False | XLOC_006585 |
TCONS_00012721 | other | downstream | 762888 | 22839821 ~ 22843805 (-) | True | XLOC_006584 |
TCONS_00012752 | other | upstream | 349332 | 23961292 ~ 23961406 (-) | True | XLOC_006602 |
TCONS_00012755 | other | upstream | 515103 | 24127063 ~ 24127179 (-) | True | XLOC_006605 |
TCONS_00012759 | other | upstream | 671710 | 24283670 ~ 24286390 (-) | True | XLOC_006607 |
TCONS_00012791 | other | upstream | 1446773 | 25058733 ~ 25199225 (-) | False | XLOC_006628 |
TCONS_00012793 | other | upstream | 1579616 | 25191576 ~ 25198063 (-) | True | XLOC_006628 |