RNA id: TCONS_00012767


Basic Information

Item Value
RNA id TCONS_00012767
length 612
RNA type mRNA
GC content 0.45
exon number 4
gene id XLOC_006614
representative True

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 24421515 ~ 24429095 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CTCCACCGCCTGGATTCCTCAACagcagtgtttttatttatttagtgtattcGTTTATCTGTTAAGCATTTGCACGTTGTTCGTTAAGGTATCGAAGGTCTTTCTTCGGTCAAAACGTTGTTTGATGACCACGTTGCCAAGTTGTCACTGTGACCAAATGAGGAACCACAGAGTCCGGATGTGTTGCTGTGGCTTTTGGAGTTGACAAGGCCTTATCATACACCTCCTCACTGATGGAGAACAAGAACTATGAGAGATGGAAGTCCAGGATCCCGGAGTTCATCCGGAGTGGTCACTCTGGAACTCTCAGTTGCAGAACTGATGAGAGGACAAGGCCTGCAAAAGTCCAGGAGACCAAAGACTCAGACAAAGAGAGGAGTGGCTGCAAAAAGACAGTCACCTTGGCACCTGTTTCCAGGTATATGACGGATAAAAGCCTCTATACCATGAGAAAACCACTGATCTCTACACAATATCAGATGCCCATCCTGAAGAACTCCCTCACACATGAAGACTCAGAGAGGATCAGTTACAAAGCAGATACCTCTAAAGAAAAGGACAAAGGTCTACCCACGCAGCCATTCAGAAGTATTAAAGAAGTTTCTCCATGTT

Function

GO:

id name namespace
GO:0003674 molecular_function molecular_function

KEGG:

id description
ko03036 Chromosome and associated proteins

ZFIN:

id description
ZDB-GENE-030616-565 Orthologous to human CEP68 (centrosomal protein 68).

Ensembl:

ensembl_id ENSDART00000147514

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00013481 lncRNA downstream 73538 24346989 ~ 24351543 (-) True XLOC_006611
TCONS_00013784 lncRNA downstream 1013450 23408029 ~ 23411631 (-) False XLOC_006597
TCONS_00013785 lncRNA downstream 1014522 23408669 ~ 23410559 (-) True XLOC_006597
TCONS_00013783 lncRNA downstream 1207263 23212759 ~ 23217818 (-) False XLOC_006595
TCONS_00013786 lncRNA upstream 144020 24573086 ~ 24574746 (-) True XLOC_006616
TCONS_00013787 lncRNA upstream 148199 24577265 ~ 24578022 (-) True XLOC_006617
TCONS_00012770 lncRNA upstream 156158 24585224 ~ 24588220 (-) True XLOC_006618
TCONS_00013788 lncRNA upstream 161354 24590420 ~ 24623225 (-) True XLOC_006619
TCONS_00012771 lncRNA upstream 173344 24602410 ~ 24606627 (-) False XLOC_006620
TCONS_00012764 mRNA downstream 28882 24381344 ~ 24396199 (-) False XLOC_006613
TCONS_00012765 mRNA downstream 29078 24384169 ~ 24396003 (-) True XLOC_006613
TCONS_00012763 mRNA downstream 45810 24371815 ~ 24379271 (-) True XLOC_006612
TCONS_00012762 mRNA downstream 92586 24329771 ~ 24332495 (-) True XLOC_006610
TCONS_00012761 mRNA downstream 96287 24325413 ~ 24328794 (-) True XLOC_006609
TCONS_00012768 mRNA upstream 852 24429918 ~ 24448278 (-) False XLOC_006615
TCONS_00012769 mRNA upstream 2923 24431989 ~ 24447332 (-) True XLOC_006615
TCONS_00012772 mRNA upstream 236268 24665334 ~ 24669258 (-) True XLOC_006621
TCONS_00012773 mRNA upstream 272340 24701406 ~ 24717618 (-) False XLOC_006622
TCONS_00012774 mRNA upstream 272692 24701758 ~ 24717388 (-) False XLOC_006622
TCONS_00012759 other downstream 138691 24283670 ~ 24286390 (-) True XLOC_006607
TCONS_00012755 other downstream 297902 24127063 ~ 24127179 (-) True XLOC_006605
TCONS_00012752 other downstream 463675 23961292 ~ 23961406 (-) True XLOC_006602
TCONS_00012744 other downstream 911278 23488297 ~ 23513803 (-) False XLOC_006598
TCONS_00012725 other downstream 1566626 22856335 ~ 22858455 (-) True XLOC_006586
TCONS_00012791 other upstream 629667 25058733 ~ 25199225 (-) False XLOC_006628
TCONS_00012793 other upstream 762510 25191576 ~ 25198063 (-) True XLOC_006628
TCONS_00012805 other upstream 1101468 25530534 ~ 25530648 (-) True XLOC_006633
TCONS_00012810 other upstream 1116610 25545676 ~ 25548614 (-) False XLOC_006634
TCONS_00012832 other upstream 2138000 26567066 ~ 26567184 (-) True XLOC_006646

Expression Profile

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