Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00012817 |
| length | 818 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 9 |
| gene id | XLOC_006637 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007124.7 |
| NCBI id | CM002897.2 |
| chromosome length | 52186027 |
| location | 25642050 ~ 25720907 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-060503-809 | Predicted to be located in membrane. Predicted to be integral component of membrane. Human ortholog(s) of this gene implicated in mucopolysaccharidosis type IIIC and retinitis pigmentosa 73. Orthologous to human HGSNAT (heparan-alpha-glucosaminide N-acetyltransferase). |
| ensembl_id | ENSDART00000146487 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00012811 | lncRNA | downstream | 133854 | 25546885 ~ 25548821 (-) | True | XLOC_006634 |
| TCONS_00012809 | lncRNA | downstream | 141989 | 25535213 ~ 25540686 (-) | False | XLOC_006634 |
| TCONS_00012804 | lncRNA | downstream | 197942 | 25478646 ~ 25484733 (-) | True | XLOC_006632 |
| TCONS_00012801 | lncRNA | downstream | 205305 | 25473206 ~ 25477370 (-) | False | XLOC_006632 |
| TCONS_00012796 | lncRNA | downstream | 460181 | 25221175 ~ 25222494 (-) | True | XLOC_006629 |
| TCONS_00012823 | lncRNA | upstream | 48472 | 25769379 ~ 25773925 (-) | True | XLOC_006639 |
| TCONS_00013791 | lncRNA | upstream | 55482 | 25776389 ~ 25778815 (-) | True | XLOC_006640 |
| TCONS_00012826 | lncRNA | upstream | 104420 | 25825327 ~ 25827135 (-) | True | XLOC_006642 |
| TCONS_00013792 | lncRNA | upstream | 125625 | 25846532 ~ 25852256 (-) | False | XLOC_006643 |
| TCONS_00013793 | lncRNA | upstream | 125625 | 25846532 ~ 25853311 (-) | True | XLOC_006643 |
| TCONS_00012814 | mRNA | downstream | 49919 | 25584556 ~ 25632756 (-) | False | XLOC_006636 |
| TCONS_00012813 | mRNA | downstream | 49919 | 25584556 ~ 25632756 (-) | True | XLOC_006636 |
| TCONS_00012812 | mRNA | downstream | 101372 | 25569831 ~ 25581303 (-) | True | XLOC_006635 |
| TCONS_00012807 | mRNA | downstream | 133793 | 25534984 ~ 25548882 (-) | False | XLOC_006634 |
| TCONS_00012818 | mRNA | upstream | 4640 | 25725547 ~ 25745089 (-) | False | XLOC_006638 |
| TCONS_00012819 | mRNA | upstream | 6987 | 25727894 ~ 25750910 (-) | False | XLOC_006638 |
| TCONS_00012820 | mRNA | upstream | 14230 | 25735137 ~ 25745148 (-) | True | XLOC_006638 |
| TCONS_00012821 | mRNA | upstream | 42001 | 25762908 ~ 25774183 (-) | False | XLOC_006639 |
| TCONS_00012822 | mRNA | upstream | 44567 | 25765474 ~ 25767210 (-) | False | XLOC_006639 |
| TCONS_00012810 | other | downstream | 134061 | 25545676 ~ 25548614 (-) | False | XLOC_006634 |
| TCONS_00012805 | other | downstream | 152027 | 25530534 ~ 25530648 (-) | True | XLOC_006633 |
| TCONS_00012791 | other | downstream | 483450 | 25058733 ~ 25199225 (-) | False | XLOC_006628 |
| TCONS_00012793 | other | downstream | 484612 | 25191576 ~ 25198063 (-) | True | XLOC_006628 |
| TCONS_00012759 | other | downstream | 1396285 | 24283670 ~ 24286390 (-) | True | XLOC_006607 |
| TCONS_00012832 | other | upstream | 846159 | 26567066 ~ 26567184 (-) | True | XLOC_006646 |
| TCONS_00012849 | other | upstream | 1930272 | 27651179 ~ 27663072 (-) | False | XLOC_006653 |
| TCONS_00012853 | other | upstream | 1969253 | 27690160 ~ 27690276 (-) | True | XLOC_006654 |
| TCONS_00012858 | other | upstream | 2458527 | 28179434 ~ 28179550 (-) | True | XLOC_006658 |
| TCONS_00012861 | other | upstream | 2555991 | 28276898 ~ 28295414 (-) | False | XLOC_006661 |
