RNA id: TCONS_00012832


Basic Information

Item Value
RNA id TCONS_00012832
length 119
RNA type rRNA
GC content 0.50
exon number 1
gene id XLOC_006646
representative True

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 26567066 ~ 26567184 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

gtttacggccataccaccctcaCTGTGCCTGATCTTGTCTGATCTCAGAAGCTAAGTGGTGTTttgcctggttagtacttggatggaaGACTGCCTGGGAATGCCAGGTGCTGTGTGTA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000116803

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00013801 lncRNA downstream 22250 26533354 ~ 26544816 (-) True XLOC_006645
TCONS_00012828 lncRNA downstream 356697 26186099 ~ 26210369 (-) False XLOC_006644
TCONS_00013482 lncRNA downstream 356697 26205821 ~ 26210369 (-) False XLOC_006644
TCONS_00012827 lncRNA downstream 380840 26051785 ~ 26186226 (-) False XLOC_006644
TCONS_00013793 lncRNA downstream 713755 25846532 ~ 25853311 (-) True XLOC_006643
TCONS_00013804 lncRNA upstream 81222 26648406 ~ 26703804 (-) False XLOC_006644
TCONS_00013483 lncRNA upstream 93511 26660695 ~ 26703800 (-) False XLOC_006644
TCONS_00012833 lncRNA upstream 122295 26689479 ~ 26703804 (-) True XLOC_006644
TCONS_00012835 lncRNA upstream 213384 26780568 ~ 26786084 (-) False XLOC_006647
TCONS_00012836 lncRNA upstream 230212 26797396 ~ 26799173 (-) True XLOC_006647
TCONS_00012825 mRNA downstream 724992 25824345 ~ 25842074 (-) False XLOC_006642
TCONS_00012824 mRNA downstream 747241 25795511 ~ 25819825 (-) True XLOC_006641
TCONS_00012821 mRNA downstream 792883 25762908 ~ 25774183 (-) False XLOC_006639
TCONS_00012822 mRNA downstream 799856 25765474 ~ 25767210 (-) False XLOC_006639
TCONS_00012819 mRNA downstream 816156 25727894 ~ 25750910 (-) False XLOC_006638
TCONS_00012834 mRNA upstream 212820 26780004 ~ 26799244 (-) False XLOC_006647
TCONS_00012838 mRNA upstream 433210 27000394 ~ 27038407 (-) False XLOC_006648
TCONS_00012839 mRNA upstream 765472 27332656 ~ 27354033 (-) False XLOC_006651
TCONS_00012840 mRNA upstream 765482 27332666 ~ 27354003 (-) True XLOC_006651
TCONS_00012841 mRNA upstream 811673 27378857 ~ 27388097 (-) False XLOC_006652
TCONS_00012810 other downstream 1018452 25545676 ~ 25548614 (-) False XLOC_006634
TCONS_00012805 other downstream 1036418 25530534 ~ 25530648 (-) True XLOC_006633
TCONS_00012791 other downstream 1367841 25058733 ~ 25199225 (-) False XLOC_006628
TCONS_00012793 other downstream 1369003 25191576 ~ 25198063 (-) True XLOC_006628
TCONS_00012759 other downstream 2280676 24283670 ~ 24286390 (-) True XLOC_006607
TCONS_00012849 other upstream 1083995 27651179 ~ 27663072 (-) False XLOC_006653
TCONS_00012853 other upstream 1122976 27690160 ~ 27690276 (-) True XLOC_006654
TCONS_00012858 other upstream 1612250 28179434 ~ 28179550 (-) True XLOC_006658
TCONS_00012861 other upstream 1709714 28276898 ~ 28295414 (-) False XLOC_006661
TCONS_00012862 other upstream 1718678 28285862 ~ 28417158 (-) True XLOC_006661