RNA id: TU7203


Basic Information

Item Value
RNA id TU7203
length 287
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G6515
representative True

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 9453062 ~ 9453348 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AGCCAATGGACATCACACAAGAAGCAACGTGCAAACTTTGCGCAAGAGTTATGCCGGTGAAAGCTTAACCTCGGTCAGTAGGCTATTCAAAGTGAAAGTAAAAAGTGATGGAGCTGTCTGATGCTGCATTAACGGACCATATTCTTTCAGAGACGAATTTCAACATAATATGCTGATAACGGTATATAACTGTCTTAATTTATTCCATTATTTTTCTTGTGGCCCATATAGTGAAACAAATGAGAATAATAGTATTTCGTGTTAAACAGGTTGTATTTTTTAAGTCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU7201 lncRNA downstream 1892 9450908 ~ 9451170 (-) True CI01000000_09451613_09452011
TU6906 lncRNA downstream 85489 9367348 ~ 9367573 (-) True G6229
TU6879 lncRNA downstream 118677 9333600 ~ 9334385 (-) True G6202
TU6773 lncRNA downstream 260945 9169999 ~ 9192117 (-) True G6096
TU6719 lncRNA downstream 347637 9105191 ~ 9105425 (-) True G6049
TU7204 lncRNA upstream 736 9454084 ~ 9454294 (-) True G6516
TU7151 lncRNA upstream 66574 9519922 ~ 9529350 (-) True G6463
TU7148 lncRNA upstream 117510 9570858 ~ 9586592 (-) True G6460
TU7209 lncRNA upstream 198176 9651524 ~ 9651735 (-) True G6521
TU7215 lncRNA upstream 206877 9660225 ~ 9660450 (-) True G6527
CI01000000_09451613_09452011.mRNA mRNA downstream 876 9450612 ~ 9452186 (-) False CI01000000_09451613_09452011
CI01000000_09421380_09425048.mRNA mRNA downstream 28014 9421277 ~ 9425048 (-) True CI01000000_09421380_09425048
CI01000000_09059743_09060201.mRNA mRNA downstream 392861 9059642 ~ 9060201 (-) True CI01000000_09059743_09060201
CI01000000_09046286_09058330.mRNA mRNA downstream 394732 9045128 ~ 9058330 (-) True CI01000000_09046286_09058330
CI01000000_08992501_08994328.mRNA mRNA downstream 458301 8992262 ~ 8994761 (-) False CI01000000_08992501_08994328
CI01000000_09469075_09494668.mRNA mRNA upstream 15672 9469020 ~ 9495980 (-) True CI01000000_09469075_09494668
CI01000000_09506970_09508416.mRNA mRNA upstream 52944 9506292 ~ 9509326 (-) True CI01000000_09506970_09508416
CI01000000_09530735_09630567.mRNA mRNA upstream 77387 9530735 ~ 9630567 (-) True CI01000000_09530735_09630567
CI01000000_09913788_09975299.mRNA mRNA upstream 460311 9913659 ~ 9976167 (-) True CI01000000_09913788_09975299
CI01000000_10096840_10101549.mRNA mRNA upstream 643376 10096724 ~ 10101758 (-) True CI01000000_10096840_10101549
TU4363 other downstream 3049537 6157013 ~ 6403525 (-) False G3931
TU4125 other downstream 3452293 6000407 ~ 6000769 (-) True G3716
TU4058 other downstream 3912181 5540463 ~ 5540881 (-) True G3650
TU3917 other downstream 3986546 5465454 ~ 5465799 (-) True G3519
TU3038 other downstream 5062910 4386383 ~ 4390152 (-) True G2730
TU8769 other upstream 950980 10404328 ~ 10414513 (-) True G7948
TU8770 other upstream 1371063 10827450 ~ 10827595 (-) True G7949
TU8948 other upstream 1586921 11040269 ~ 11040909 (-) True G8125
TU9592 other upstream 3831976 13285324 ~ 13311429 (-) False G8699
TU9587 other upstream 3850928 13304276 ~ 13311429 (-) True G8699

Expression Profile