RNA id: TU8911



Basic Information


Item Value
RNA id TU8911
length 490
lncRNA type antisense_over
GC content 0.47
exon number 1
gene id G8088
representative True

Chromosome Information


Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 10922068 ~ 10922557 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CAAAGCCTCTCTCACTCACCCCTTTGATAATGAACAGGATTTTGCCATAGCAGAAGATCATGAGCATCAGGGGTAAAAGCAGACAGAAGATAAACAGGCACATCACGTATGACATGCTGTTGGTTGAGCGCAGGTGCCACTGCACTGAGCATGTAGTCCCGGGTCCTTCGGGTCCATAGCTACTCCAGCCCAGGAATGGTGGGAGAGTCCATACCAGTGAATAGAGCCAGGATCCTGCCACACAGAGCCAGGCCCTGTGGAAGTCAGACACGTCTGCCTTGGTGGGGCGCAGTAGGGCGGCATAACGCTCGTATGACAGTATGGACAGAGACATCAGAGACACAATTCCTGTTTGGGATAAAGAAAGCTGATATGGAAAAGAAATAGTGGTCACAAAACAACTAACTTTTTATTGGAATATACTGTTAATACTGTATACACTGTGTATACTGTAGTCAAATGGACTATTTTAACGATGTCTTTACTACCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU8910 lncRNA downstream 833 10921028 ~ 10921235 (-) True G8087
TU8905 lncRNA downstream 4174 10917694 ~ 10917894 (-) True G8082
TU8904 lncRNA downstream 4884 10916985 ~ 10917184 (-) True G8081
TU8903 lncRNA downstream 5753 10916010 ~ 10916315 (-) True G8080
TU8817 lncRNA downstream 125839 10795360 ~ 10796229 (-) True G7996
TU8917 lncRNA upstream 8649 10931206 ~ 10931730 (-) True G8094
TU8937 lncRNA upstream 102049 11024606 ~ 11024893 (-) True G8114
TU8945 lncRNA upstream 112302 11034859 ~ 11035227 (-) True G8122
TU8959 lncRNA upstream 128094 11050651 ~ 11051032 (-) True G8134
TU8956 lncRNA upstream 132156 11054713 ~ 11055263 (-) True G8131
CI01000000_10865036_10883334.mRNA mRNA downstream 38734 10865020 ~ 10883334 (-) True CI01000000_10865036_10883334
CI01000000_10824957_10825464.mRNA mRNA downstream 96604 10824324 ~ 10825464 (-) False CI01000000_10824957_10825464
CI01000000_10785646_10788722.mRNA mRNA downstream 133346 10785510 ~ 10788722 (-) True CI01000000_10785646_10788722
CI01000000_10745761_10748814.mRNA mRNA downstream 170862 10745535 ~ 10751206 (-) True CI01000000_10745761_10748814
CI01000000_10734747_10737823.mRNA mRNA downstream 184245 10734550 ~ 10737823 (-) True CI01000000_10734747_10737823
CI01000000_10945347_10977876.mRNA mRNA upstream 21325 10943882 ~ 10977876 (-) True CI01000000_10945347_10977876
CI01000000_10979945_10982820.mRNA mRNA upstream 57082 10979639 ~ 10982820 (-) True CI01000000_10979945_10982820
CI01000000_10998739_11000052.mRNA mRNA upstream 75907 10998464 ~ 11001881 (-) True CI01000000_10998739_11000052
CI01000000_11066680_11069224.mRNA mRNA upstream 143900 11066457 ~ 11070260 (-) False CI01000000_11066680_11069224
CI01000000_11108925_11118542.mRNA mRNA upstream 186124 11108681 ~ 11119357 (-) True CI01000000_11108925_11118542
TU8770 other downstream 94473 10827450 ~ 10827595 (-) True G7949
TU8769 other downstream 507555 10404328 ~ 10414513 (-) True G7948
TU4363 other downstream 4518543 6157013 ~ 6403525 (-) False G3931
TU4125 other downstream 4921299 6000407 ~ 6000769 (-) True G3716
TU4058 other downstream 5381187 5540463 ~ 5540881 (-) True G3650
TU8948 other upstream 117712 11040269 ~ 11040909 (-) True G8125
TU9592 other upstream 2362767 13285324 ~ 13311429 (-) False G8699
TU9587 other upstream 2381719 13304276 ~ 13311429 (-) True G8699
TU9950 other upstream 2804243 13726800 ~ 13727090 (-) True G9036
TU10603 other upstream 3418445 14341002 ~ 14346534 (-) True G9602

Expression Profile