RNA id: TCONS_00012853


Basic Information

Item Value
RNA id TCONS_00012853
length 117
RNA type rRNA
GC content 0.51
exon number 1
gene id XLOC_006654
representative True

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 27690160 ~ 27690276 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TGCCAGAGCCATATCAACCTGCACCCCAAGACCActtacttactgaagctaagcagggctgaagctggtcagtacctggatgggagaccacacaAGCAAACTAGGtagctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000187425

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00013806 lncRNA downstream 412451 27271338 ~ 27277709 (-) True XLOC_006650
TCONS_00013805 lncRNA downstream 462410 27227361 ~ 27227750 (-) True XLOC_006649
TCONS_00012837 lncRNA downstream 651753 27000394 ~ 27038407 (-) True XLOC_006648
TCONS_00012836 lncRNA downstream 890987 26797396 ~ 26799173 (-) True XLOC_006647
TCONS_00012835 lncRNA downstream 904076 26780568 ~ 26786084 (-) False XLOC_006647
TCONS_00013807 lncRNA upstream 111139 27801415 ~ 27816607 (-) False XLOC_006655
TCONS_00013808 lncRNA upstream 111139 27801415 ~ 27816617 (-) False XLOC_006655
TCONS_00013809 lncRNA upstream 111139 27801415 ~ 27816641 (-) True XLOC_006655
TCONS_00013810 lncRNA upstream 737201 28427477 ~ 28444818 (-) True XLOC_006663
TCONS_00013811 lncRNA upstream 807526 28497802 ~ 28513141 (-) False XLOC_006664
TCONS_00012852 mRNA downstream 14948 27666346 ~ 27675212 (-) True XLOC_006653
TCONS_00012845 mRNA downstream 29205 27631926 ~ 27660955 (-) False XLOC_006653
TCONS_00012850 mRNA downstream 29205 27658569 ~ 27660955 (-) False XLOC_006653
TCONS_00012848 mRNA downstream 36481 27634523 ~ 27653679 (-) False XLOC_006653
TCONS_00012843 mRNA downstream 68914 27378857 ~ 27621246 (-) False XLOC_006652
TCONS_00012854 mRNA upstream 210170 27900446 ~ 27916565 (-) False XLOC_006656
TCONS_00012855 mRNA upstream 211490 27901766 ~ 27916439 (-) True XLOC_006656
TCONS_00012856 mRNA upstream 319451 28009727 ~ 28263868 (-) False XLOC_006657
TCONS_00012857 mRNA upstream 319453 28009729 ~ 28263856 (-) True XLOC_006657
TCONS_00012859 mRNA upstream 574558 28264834 ~ 28265919 (-) True XLOC_006659
TCONS_00012849 other downstream 27088 27651179 ~ 27663072 (-) False XLOC_006653
TCONS_00012832 other downstream 1122976 26567066 ~ 26567184 (-) True XLOC_006646
TCONS_00012810 other downstream 2141546 25545676 ~ 25548614 (-) False XLOC_006634
TCONS_00012805 other downstream 2159512 25530534 ~ 25530648 (-) True XLOC_006633
TCONS_00012791 other downstream 2490935 25058733 ~ 25199225 (-) False XLOC_006628
TCONS_00012858 other upstream 489158 28179434 ~ 28179550 (-) True XLOC_006658
TCONS_00012861 other upstream 586622 28276898 ~ 28295414 (-) False XLOC_006661
TCONS_00012862 other upstream 595586 28285862 ~ 28417158 (-) True XLOC_006661
TCONS_00012879 other upstream 1816384 29506660 ~ 29507601 (-) False XLOC_006678
TCONS_00012895 other upstream 2941829 30632105 ~ 30632219 (-) True XLOC_006693