RNA id: TCONS_00012858


Basic Information

Item Value
RNA id TCONS_00012858
length 117
RNA type rRNA
GC content 0.51
exon number 1
gene id XLOC_006658
representative True

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 28179434 ~ 28179550 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

tccggccctgcatatCACCCTGTAACTctagaccggttactcactgaagctaagcaggggtgagcctggtcagtacctggatggtagaccacatgagaaaataggttgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000177432

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00013809 lncRNA downstream 362793 27801415 ~ 27816641 (-) True XLOC_006655
TCONS_00013808 lncRNA downstream 362817 27801415 ~ 27816617 (-) False XLOC_006655
TCONS_00013807 lncRNA downstream 362827 27801415 ~ 27816607 (-) False XLOC_006655
TCONS_00013806 lncRNA downstream 901725 27271338 ~ 27277709 (-) True XLOC_006650
TCONS_00013805 lncRNA downstream 951684 27227361 ~ 27227750 (-) True XLOC_006649
TCONS_00013810 lncRNA upstream 247927 28427477 ~ 28444818 (-) True XLOC_006663
TCONS_00013811 lncRNA upstream 318252 28497802 ~ 28513141 (-) False XLOC_006664
TCONS_00012864 lncRNA upstream 320777 28500327 ~ 28513347 (-) True XLOC_006664
TCONS_00013812 lncRNA upstream 366862 28546412 ~ 28572464 (-) True XLOC_006665
TCONS_00013813 lncRNA upstream 497571 28677121 ~ 28680434 (-) False XLOC_006668
TCONS_00012854 mRNA downstream 262869 27900446 ~ 27916565 (-) False XLOC_006656
TCONS_00012855 mRNA downstream 262995 27901766 ~ 27916439 (-) True XLOC_006656
TCONS_00012847 mRNA downstream 411991 27631926 ~ 27767443 (-) False XLOC_006653
TCONS_00012846 mRNA downstream 411991 27631926 ~ 27767443 (-) False XLOC_006653
TCONS_00012851 mRNA downstream 412104 27666273 ~ 27767330 (-) False XLOC_006653
TCONS_00012859 mRNA upstream 85284 28264834 ~ 28265919 (-) True XLOC_006659
TCONS_00012860 mRNA upstream 88447 28267997 ~ 28272299 (-) True XLOC_006660
TCONS_00012863 mRNA upstream 126248 28305798 ~ 28308138 (-) True XLOC_006662
TCONS_00012865 mRNA upstream 421645 28601195 ~ 28610965 (-) True XLOC_006666
TCONS_00012866 mRNA upstream 455312 28634862 ~ 28672474 (-) False XLOC_006667
TCONS_00012853 other downstream 489158 27690160 ~ 27690276 (-) True XLOC_006654
TCONS_00012849 other downstream 516362 27651179 ~ 27663072 (-) False XLOC_006653
TCONS_00012832 other downstream 1612250 26567066 ~ 26567184 (-) True XLOC_006646
TCONS_00012810 other downstream 2630820 25545676 ~ 25548614 (-) False XLOC_006634
TCONS_00012805 other downstream 2648786 25530534 ~ 25530648 (-) True XLOC_006633
TCONS_00012861 other upstream 97348 28276898 ~ 28295414 (-) False XLOC_006661
TCONS_00012862 other upstream 106312 28285862 ~ 28417158 (-) True XLOC_006661
TCONS_00012879 other upstream 1327110 29506660 ~ 29507601 (-) False XLOC_006678
TCONS_00012895 other upstream 2452555 30632105 ~ 30632219 (-) True XLOC_006693
TCONS_00012900 other upstream 2485269 30664819 ~ 30700459 (-) False XLOC_006695