Item | Value |
---|---|
RNA id | CI01000001_04976994_04988795.mRNA |
length | 4306 |
RNA type | mRNA |
GC content | 0.47 |
exon number | 24 |
gene id | CI01000001_04976994_04988795 |
representative | True |
Item | Value |
---|---|
chromosome id | CI01000001 |
NCBI id | null |
chromosome length | 13537560 |
location | 4976347 ~ 4989082 (+) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
species | grasscarp (Ctenopharyngodon idella) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU17642 | lncRNA | upstream | 40357 | 4935371 ~ 4935990 (+) | True | G15789 |
TU17240 | lncRNA | upstream | 174817 | 4800973 ~ 4801530 (+) | True | G15419 |
TU17237 | lncRNA | upstream | 178553 | 4797476 ~ 4797794 (+) | True | G15416 |
TU17216 | lncRNA | upstream | 217928 | 4753717 ~ 4758419 (+) | True | G15395 |
TU17199 | lncRNA | upstream | 249607 | 4726188 ~ 4726740 (+) | True | G15389 |
TU17657 | lncRNA | downstream | 14088 | 5003170 ~ 5003390 (+) | True | G15798 |
TU17659 | lncRNA | downstream | 16740 | 5005822 ~ 5006037 (+) | True | G15800 |
TU17671 | lncRNA | downstream | 52284 | 5041366 ~ 5041565 (+) | True | G15812 |
TU17676 | lncRNA | downstream | 71725 | 5060807 ~ 5061182 (+) | True | G15817 |
TU17654 | lncRNA | downstream | 81390 | 5074401 ~ 5074805 (+) | False | G15796 |
CI01000001_04962494_04971921.mRNA | mRNA | upstream | 4116 | 4962494 ~ 4972231 (+) | True | CI01000001_04962494_04971921 |
CI01000001_04950531_04960550.mRNA | mRNA | upstream | 15652 | 4950531 ~ 4960695 (+) | True | CI01000001_04950531_04960550 |
CI01000001_04936808_04943256.mRNA | mRNA | upstream | 32892 | 4936808 ~ 4943455 (+) | True | CI01000001_04936808_04943256 |
CI01000001_04914279_04922772.mRNA | mRNA | upstream | 52668 | 4914150 ~ 4923679 (+) | True | CI01000001_04914279_04922772 |
CI01000001_04901365_04901652.mRNA | mRNA | upstream | 73780 | 4901275 ~ 4902567 (+) | True | CI01000001_04901365_04901652 |
CI01000001_04993860_04998535.mRNA | mRNA | downstream | 4778 | 4993860 ~ 4998761 (+) | True | CI01000001_04993860_04998535 |
CI01000001_05051664_05059659.mRNA | mRNA | downstream | 62447 | 5051529 ~ 5059940 (+) | True | CI01000001_05051664_05059659 |
CI01000001_05071017_05075175.mRNA | mRNA | downstream | 80221 | 5069303 ~ 5075753 (+) | False | CI01000001_05071017_05075175 |
CI01000001_05075984_05079729.mRNA | mRNA | downstream | 86902 | 5075984 ~ 5079731 (+) | False | CI01000001_05075984_05079729 |
CI01000001_05223340_05229184.mRNA | mRNA | downstream | 234258 | 5223340 ~ 5229659 (+) | True | CI01000001_05223340_05229184 |
TU16602 | other | upstream | 1354896 | 3616248 ~ 3616411 (+) | True | G14846 |
TU15116 | other | upstream | 3305343 | 1668020 ~ 1671004 (+) | True | CI01000001_01668334_01670035 |
TU14532 | other | upstream | 3931195 | 1043713 ~ 1045152 (+) | True | G13051 |
TU14049 | other | upstream | 4484290 | 490574 ~ 492057 (+) | True | G12653 |
TU14066 | other | upstream | 4491937 | 478386 ~ 478781 (+) | True | G12670 |
TU17650 | other | downstream | 72136 | 5061218 ~ 5064704 (+) | False | G15794 |
TU17651 | other | downstream | 72136 | 5061218 ~ 5063929 (+) | True | G15794 |
TU17699 | other | downstream | 297667 | 5289881 ~ 5289956 (+) | True | G15838 |
TU17891 | other | downstream | 722803 | 5711885 ~ 5714951 (+) | True | G15995 |
TU19033 | other | downstream | 2543490 | 7532572 ~ 7540586 (+) | False | CI01000001_07531945_07539781 |
species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
---|---|---|---|---|---|---|---|---|
zebrafish (Danio rerio) | TCONS_00042858 | True | 1174 | mRNA | 0.49 | 8 | NC_007134.7 | 17899226 ~ 17907404 (+) |