RNA id: TCONS_00012895


Basic Information

Item Value
RNA id TCONS_00012895
length 115
RNA type rRNA
GC content 0.56
exon number 1
gene id XLOC_006693
representative True

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 30632105 ~ 30632219 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GcaggcagctagctctctgcaactcttacatagtcacccactgaagctaagtagggctgtgcccagtcagtacctggatgggggaccacatgggaaagctaggctgCTGCTGGAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000184721

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00013839 lncRNA downstream 60962 30568567 ~ 30571143 (-) True XLOC_006691
TCONS_00013838 lncRNA downstream 80596 30549409 ~ 30551509 (-) True XLOC_006690
TCONS_00013488 lncRNA downstream 381541 30245673 ~ 30250564 (-) True XLOC_006689
TCONS_00012893 lncRNA downstream 470536 30158461 ~ 30161569 (-) True XLOC_006688
TCONS_00013487 lncRNA downstream 646603 29984877 ~ 29985502 (-) True XLOC_006682
TCONS_00012896 lncRNA upstream 7326 30639545 ~ 30645909 (-) True XLOC_006692
TCONS_00012899 lncRNA upstream 24211 30656430 ~ 30657492 (-) False XLOC_006694
TCONS_00012898 lncRNA upstream 24211 30656430 ~ 30659381 (-) True XLOC_006694
TCONS_00012903 lncRNA upstream 58062 30690281 ~ 30700460 (-) True XLOC_006695
TCONS_00013840 lncRNA upstream 176744 30808963 ~ 30812183 (-) True XLOC_006698
TCONS_00012892 mRNA downstream 470421 30152217 ~ 30161684 (-) False XLOC_006688
TCONS_00012891 mRNA downstream 481513 30145702 ~ 30150592 (-) True XLOC_006687
TCONS_00012890 mRNA downstream 482132 30144937 ~ 30149973 (-) False XLOC_006687
TCONS_00012888 mRNA downstream 488978 30135675 ~ 30143127 (-) False XLOC_006686
TCONS_00012889 mRNA downstream 490018 30135846 ~ 30142087 (-) True XLOC_006686
TCONS_00012897 mRNA upstream 22953 30655172 ~ 30662403 (-) False XLOC_006694
TCONS_00012901 mRNA upstream 33695 30665914 ~ 30700460 (-) False XLOC_006695
TCONS_00012902 mRNA upstream 51967 30684186 ~ 30685913 (-) True XLOC_006696
TCONS_00012904 mRNA upstream 72142 30704361 ~ 30713236 (-) False XLOC_006697
TCONS_00012905 mRNA upstream 75103 30707322 ~ 30713236 (-) True XLOC_006697
TCONS_00012879 other downstream 1124504 29506660 ~ 29507601 (-) False XLOC_006678
TCONS_00012862 other downstream 2214947 28285862 ~ 28417158 (-) True XLOC_006661
TCONS_00012861 other downstream 2336691 28276898 ~ 28295414 (-) False XLOC_006661
TCONS_00012858 other downstream 2452555 28179434 ~ 28179550 (-) True XLOC_006658
TCONS_00012853 other downstream 2941829 27690160 ~ 27690276 (-) True XLOC_006654
TCONS_00012900 other upstream 32600 30664819 ~ 30700459 (-) False XLOC_006695
TCONS_00012906 other upstream 223100 30855319 ~ 30872439 (-) True XLOC_006699
TCONS_00012916 other upstream 443614 31075833 ~ 31075947 (-) True XLOC_006705
TCONS_00012917 other upstream 494230 31126449 ~ 31127046 (-) True XLOC_006708
TCONS_00012925 other upstream 561266 31193485 ~ 31205193 (-) True XLOC_006710