Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000001_06303405_06305351.mRNA |
| length | 673 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 5 |
| gene id | CI01000001_06303405_06305351 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000001 |
| NCBI id | null |
| chromosome length | 13537560 |
| location | 6303405 ~ 6305351 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0006937 | regulation of muscle contraction | biological_process |
| id | description |
|---|---|
| K12042 | TNNC2; troponin C, skeletal muscle |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU18127 | lncRNA | upstream | 20853 | 6282339 ~ 6282552 (+) | True | G16212 |
| TU18107 | lncRNA | upstream | 76260 | 6226859 ~ 6227145 (+) | True | G16193 |
| TU18103 | lncRNA | upstream | 94625 | 6208552 ~ 6208780 (+) | True | G16189 |
| TU18102 | lncRNA | upstream | 95051 | 6207632 ~ 6208354 (+) | True | G16188 |
| TU18086 | lncRNA | upstream | 126273 | 6176623 ~ 6177132 (+) | True | G16172 |
| TU18164 | lncRNA | downstream | 127733 | 6433084 ~ 6433328 (+) | True | G16247 |
| TU18175 | lncRNA | downstream | 209770 | 6515121 ~ 6515398 (+) | True | G16257 |
| TU18220 | lncRNA | downstream | 366831 | 6672182 ~ 6673511 (+) | True | G16284 |
| TU18214 | lncRNA | downstream | 418458 | 6723809 ~ 6732925 (+) | True | CI01000001_06718133_06747744 |
| TU18253 | lncRNA | downstream | 494817 | 6800168 ~ 6800381 (+) | True | G16317 |
| CI01000001_06297032_06300530.mRNA | mRNA | upstream | 2745 | 6297032 ~ 6300660 (+) | True | CI01000001_06297032_06300530 |
| CI01000001_06121398_06124748.mRNA | mRNA | upstream | 178453 | 6121398 ~ 6124952 (+) | True | CI01000001_06121398_06124748 |
| CI01000001_06040916_06041645.mRNA | mRNA | upstream | 260795 | 6040916 ~ 6042610 (+) | True | CI01000001_06040916_06041645 |
| CI01000001_05960289_05963221.mRNA | mRNA | upstream | 340062 | 5958349 ~ 5963343 (+) | True | CI01000001_05960289_05963221 |
| CI01000001_05942155_05943721.mRNA | mRNA | upstream | 359386 | 5942155 ~ 5944019 (+) | True | CI01000001_05942155_05943721 |
| CI01000001_06309664_06321614.mRNA | mRNA | downstream | 4010 | 6309361 ~ 6322088 (+) | True | CI01000001_06309664_06321614 |
| CI01000001_06325915_06358454.mRNA | mRNA | downstream | 19723 | 6325074 ~ 6358674 (+) | True | CI01000001_06325915_06358454 |
| CI01000001_06363645_06370085.mRNA | mRNA | downstream | 58294 | 6363645 ~ 6370101 (+) | True | CI01000001_06363645_06370085 |
| CI01000001_06420606_06430104.mRNA | mRNA | downstream | 115255 | 6420606 ~ 6430133 (+) | True | CI01000001_06420606_06430104 |
| CI01000001_06442969_06455699.mRNA | mRNA | downstream | 137618 | 6442969 ~ 6455859 (+) | True | CI01000001_06442969_06455699 |
| TU17891 | other | upstream | 588454 | 5711885 ~ 5714951 (+) | True | G15995 |
| TU17699 | other | upstream | 1013449 | 5289881 ~ 5289956 (+) | True | G15838 |
| TU17650 | other | upstream | 1238701 | 5061218 ~ 5064704 (+) | False | G15794 |
| TU17651 | other | upstream | 1239476 | 5061218 ~ 5063929 (+) | True | G15794 |
| TU16602 | other | upstream | 2681954 | 3616248 ~ 3616411 (+) | True | G14846 |
| TU19033 | other | downstream | 1227221 | 7532572 ~ 7540586 (+) | False | CI01000001_07531945_07539781 |
| TU19037 | other | downstream | 1227289 | 7532640 ~ 7540586 (+) | False | CI01000001_07531945_07539781 |
| TU19034 | other | downstream | 1227413 | 7532764 ~ 7540460 (+) | True | CI01000001_07531945_07539781 |
| TU19348 | other | downstream | 1726773 | 8032124 ~ 8032483 (+) | True | G17234 |
| TU19478 | other | downstream | 2910671 | 9216022 ~ 9228859 (+) | True | G17353 |
