Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU18962 |
| length | 577 |
| lncRNA type | sense_over |
| GC content | 0.31 |
| exon number | 1 |
| gene id | G16922 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000001 |
| NCBI id | null |
| chromosome length | 13537560 |
| location | 6917686 ~ 6918262 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0005882 | intermediate filament | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU18253 | lncRNA | upstream | 115406 | 6800168 ~ 6800381 (+) | True | G16317 |
| TU18214 | lncRNA | upstream | 182862 | 6723809 ~ 6732925 (+) | True | CI01000001_06718133_06747744 |
| TU18220 | lncRNA | upstream | 242276 | 6672182 ~ 6673511 (+) | True | G16284 |
| TU18175 | lncRNA | upstream | 400389 | 6515121 ~ 6515398 (+) | True | G16257 |
| TU18164 | lncRNA | upstream | 482459 | 6433084 ~ 6433328 (+) | True | G16247 |
| TU18977 | lncRNA | downstream | 17880 | 6936142 ~ 6946151 (+) | True | G16937 |
| TU19054 | lncRNA | downstream | 173491 | 7091753 ~ 7123993 (+) | True | G16977 |
| TU19101 | lncRNA | downstream | 233832 | 7152094 ~ 7152425 (+) | True | G17019 |
| TU19046 | lncRNA | downstream | 360981 | 7279243 ~ 7284904 (+) | True | G16970 |
| TU19141 | lncRNA | downstream | 398402 | 7316664 ~ 7319030 (+) | True | G17057 |
| CI01000001_06884020_06889266.mRNA | mRNA | upstream | 25795 | 6884020 ~ 6889992 (+) | True | CI01000001_06884020_06889266 |
| CI01000001_06825263_06835397.mRNA | mRNA | upstream | 79324 | 6825263 ~ 6836463 (+) | True | CI01000001_06825263_06835397 |
| CI01000001_06718133_06747744.mRNA | mRNA | upstream | 168043 | 6717159 ~ 6747744 (+) | False | CI01000001_06718133_06747744 |
| CI01000001_06700913_06706131.mRNA | mRNA | upstream | 209364 | 6700811 ~ 6706423 (+) | True | CI01000001_06700913_06706131 |
| CI01000001_06583486_06641365.mRNA | mRNA | upstream | 274422 | 6583486 ~ 6641365 (+) | True | CI01000001_06583486_06641365 |
| CI01000001_06921000_06929478.mRNA | mRNA | downstream | 2738 | 6921000 ~ 6930359 (+) | True | CI01000001_06921000_06929478 |
| CI01000001_06939316_06939879.mRNA | mRNA | downstream | 20971 | 6939233 ~ 6940705 (+) | True | CI01000001_06939316_06939879 |
| CI01000001_06948672_06949034.mRNA | mRNA | downstream | 30324 | 6948586 ~ 6949034 (+) | True | CI01000001_06948672_06949034 |
| CI01000001_06956478_06959048.mRNA | mRNA | downstream | 37237 | 6955499 ~ 6959620 (+) | True | CI01000001_06956478_06959048 |
| CI01000001_06960133_06963752.mRNA | mRNA | downstream | 41871 | 6960133 ~ 6964430 (+) | True | CI01000001_06960133_06963752 |
| TU17891 | other | upstream | 1200836 | 5711885 ~ 5714951 (+) | True | G15995 |
| TU17699 | other | upstream | 1625831 | 5289881 ~ 5289956 (+) | True | G15838 |
| TU17650 | other | upstream | 1851083 | 5061218 ~ 5064704 (+) | False | G15794 |
| TU17651 | other | upstream | 1851858 | 5061218 ~ 5063929 (+) | True | G15794 |
| TU16602 | other | upstream | 3294336 | 3616248 ~ 3616411 (+) | True | G14846 |
| TU19033 | other | downstream | 614310 | 7532572 ~ 7540586 (+) | False | CI01000001_07531945_07539781 |
| TU19037 | other | downstream | 614378 | 7532640 ~ 7540586 (+) | False | CI01000001_07531945_07539781 |
| TU19034 | other | downstream | 614502 | 7532764 ~ 7540460 (+) | True | CI01000001_07531945_07539781 |
| TU19348 | other | downstream | 1113862 | 8032124 ~ 8032483 (+) | True | G17234 |
| TU19478 | other | downstream | 2297760 | 9216022 ~ 9228859 (+) | True | G17353 |
