RNA id: TCONS_00012902


Basic Information

Item Value
RNA id TCONS_00012902
length 1050
RNA type mRNA
GC content 0.47
exon number 7
gene id XLOC_006696
representative True

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 30684186 ~ 30685913 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATGCTAGAACAGCTCAGTCGAAGAGAGAATGTGATTGTTGGAGGAGATAAGAGGGCTGACTCCCCAGGTCACTCGGCCAAGTATGGGAGTTATACAATGATGGACCTTGCAACTAACACAGTGGTCGACCTAAAGTTAGTCCAGagTAATGAGGTGGGCGGCAGTTACCATATGGAAAAAGAAGGCCTAAAGAGAAGCCTAGACCTGTTGGATGCCCGCGGTGTTCGTCTGGAATGCATCATCACAGACCGACATCCTCAAATACAGAAATATCTCAGGGATCGAAATGTCACTCAGTTTTACGATGTGTGGCATATCGAGAAAGGAATTTCCAAAAAACTGGACAAGATATGCCAGATAAAGGGGTGTGAGAAGTTGCGTAAATGGTTGCGTAGCATCAAAAACCACATCTACTGGACTGCTGCATCATCCACAACAGGTCCTGAAAGAGTGGCAAAGTGGACCTCTATCTTAAACCATGTACATGAAGACCCCAATTTTCCGGCTTATCTGCATCCGCAACGGATAAGCAGAGACAAGAACAAATGGCTGTCGGCTGCAACGATGCCATTCTACAAGCTGGAGAAAGTTCTCGCTAACAAGAGAATATTGAAGGATGTGGCCAAGCTAAGTCCTCACCACCAGACGTCAACTGTTGAAGCTTTCCACAGCGTCCTACTGCGGTTTGCACCCAAAAATGTGGTATTCCCATTTCTGGGGATGCTATGCAGgtTGTACTTGGCTGCACTGCATTACAATGAAAATGCCGGGCGTCCCCAGGCCACATCAGCAACTGGTAAACCTATTTACAAGCTTGCCTTTCCAAAGGCAAAGAAAGGAGAGTATAGGGTCCGAAAAGTGAAGACGCAGCAAACTTTCgGTTATGTAAAAGAGCTGCTGGACCTCATCTTCAACCAAGTGTTTGTGGACCCATCACCCTATGTTGATGAAGTGTTGGGAATTCACATACCACCTGCTCTATCATCAGCCTGCGATCTACCTGAGATGGAGGAGGCTATCTCCAGCAGGGTGACCCGCTTCAATCAATAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000191521

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00012898 lncRNA downstream 24805 30656430 ~ 30659381 (-) True XLOC_006694
TCONS_00012899 lncRNA downstream 26694 30656430 ~ 30657492 (-) False XLOC_006694
TCONS_00012896 lncRNA downstream 38277 30639545 ~ 30645909 (-) True XLOC_006692
TCONS_00013839 lncRNA downstream 113043 30568567 ~ 30571143 (-) True XLOC_006691
TCONS_00013838 lncRNA downstream 132677 30549409 ~ 30551509 (-) True XLOC_006690
TCONS_00012903 lncRNA upstream 4368 30690281 ~ 30700460 (-) True XLOC_006695
TCONS_00013840 lncRNA upstream 123050 30808963 ~ 30812183 (-) True XLOC_006698
TCONS_00012911 lncRNA upstream 356601 31042514 ~ 31045645 (-) False XLOC_006703
TCONS_00012912 lncRNA upstream 358889 31044802 ~ 31051156 (-) True XLOC_006703
TCONS_00012913 lncRNA upstream 366623 31052536 ~ 31060030 (-) False XLOC_006704
TCONS_00012897 mRNA downstream 21783 30655172 ~ 30662403 (-) False XLOC_006694
TCONS_00012894 mRNA downstream 38221 30579260 ~ 30645965 (-) False XLOC_006692
TCONS_00012892 mRNA downstream 522502 30152217 ~ 30161684 (-) False XLOC_006688
TCONS_00012891 mRNA downstream 533594 30145702 ~ 30150592 (-) True XLOC_006687
TCONS_00012890 mRNA downstream 534213 30144937 ~ 30149973 (-) False XLOC_006687
TCONS_00012904 mRNA upstream 18448 30704361 ~ 30713236 (-) False XLOC_006697
TCONS_00012905 mRNA upstream 21409 30707322 ~ 30713236 (-) True XLOC_006697
TCONS_00012907 mRNA upstream 299134 30985047 ~ 31008275 (-) False XLOC_006700
TCONS_00012908 mRNA upstream 299586 30985499 ~ 30996072 (-) True XLOC_006700
TCONS_00012909 mRNA upstream 329634 31015547 ~ 31017960 (-) True XLOC_006701
TCONS_00012895 other downstream 51967 30632105 ~ 30632219 (-) True XLOC_006693
TCONS_00012879 other downstream 1176585 29506660 ~ 29507601 (-) False XLOC_006678
TCONS_00012862 other downstream 2267028 28285862 ~ 28417158 (-) True XLOC_006661
TCONS_00012861 other downstream 2388772 28276898 ~ 28295414 (-) False XLOC_006661
TCONS_00012858 other downstream 2504636 28179434 ~ 28179550 (-) True XLOC_006658
TCONS_00012906 other upstream 169406 30855319 ~ 30872439 (-) True XLOC_006699
TCONS_00012916 other upstream 389920 31075833 ~ 31075947 (-) True XLOC_006705
TCONS_00012917 other upstream 440536 31126449 ~ 31127046 (-) True XLOC_006708
TCONS_00012925 other upstream 507572 31193485 ~ 31205193 (-) True XLOC_006710
TCONS_00012930 other upstream 660682 31346595 ~ 31351772 (-) True XLOC_006712