RNA id: TCONS_00012916


Basic Information

Item Value
RNA id TCONS_00012916
length 115
RNA type rRNA
GC content 0.56
exon number 1
gene id XLOC_006705
representative True

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 31075833 ~ 31075947 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

AATTGCAGcgagctctctgcaactctcgcatggtcgcccactgaagctaagaagggttgcacctggtcagtaccaggatgggagaccacatgggaaagctaggttgctgccggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000190479

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00012915 lncRNA downstream 14017 31059284 ~ 31061816 (-) True XLOC_006704
TCONS_00012914 lncRNA downstream 14800 31057365 ~ 31061033 (-) False XLOC_006704
TCONS_00012913 lncRNA downstream 15803 31052536 ~ 31060030 (-) False XLOC_006704
TCONS_00012912 lncRNA downstream 24677 31044802 ~ 31051156 (-) True XLOC_006703
TCONS_00012911 lncRNA downstream 30188 31042514 ~ 31045645 (-) False XLOC_006703
TCONS_00013841 lncRNA upstream 13639 31089586 ~ 31092400 (-) True XLOC_006706
TCONS_00013842 lncRNA upstream 26960 31102907 ~ 31122760 (-) False XLOC_006707
TCONS_00013843 lncRNA upstream 29229 31105176 ~ 31122760 (-) False XLOC_006707
TCONS_00013844 lncRNA upstream 32579 31108526 ~ 31122838 (-) True XLOC_006707
TCONS_00012923 lncRNA upstream 84240 31160187 ~ 31166605 (-) False XLOC_006709
TCONS_00012910 mRNA downstream 50328 31024711 ~ 31025505 (-) True XLOC_006702
TCONS_00012909 mRNA downstream 57873 31015547 ~ 31017960 (-) True XLOC_006701
TCONS_00012907 mRNA downstream 67558 30985047 ~ 31008275 (-) False XLOC_006700
TCONS_00012908 mRNA downstream 79761 30985499 ~ 30996072 (-) True XLOC_006700
TCONS_00012904 mRNA downstream 362597 30704361 ~ 30713236 (-) False XLOC_006697
TCONS_00012918 mRNA upstream 71571 31147518 ~ 31166559 (-) False XLOC_006709
TCONS_00012919 mRNA upstream 71990 31147937 ~ 31166563 (-) False XLOC_006709
TCONS_00012920 mRNA upstream 71991 31147938 ~ 31164749 (-) False XLOC_006709
TCONS_00012922 mRNA upstream 72290 31148237 ~ 31167461 (-) False XLOC_006709
TCONS_00012921 mRNA upstream 72290 31148237 ~ 31167461 (-) False XLOC_006709
TCONS_00012906 other downstream 203394 30855319 ~ 30872439 (-) True XLOC_006699
TCONS_00012900 other downstream 375374 30664819 ~ 30700459 (-) False XLOC_006695
TCONS_00012895 other downstream 443614 30632105 ~ 30632219 (-) True XLOC_006693
TCONS_00012879 other downstream 1568232 29506660 ~ 29507601 (-) False XLOC_006678
TCONS_00012862 other downstream 2658675 28285862 ~ 28417158 (-) True XLOC_006661
TCONS_00012917 other upstream 50502 31126449 ~ 31127046 (-) True XLOC_006708
TCONS_00012925 other upstream 117538 31193485 ~ 31205193 (-) True XLOC_006710
TCONS_00012930 other upstream 270648 31346595 ~ 31351772 (-) True XLOC_006712
TCONS_00012938 other upstream 348643 31424590 ~ 31440940 (-) False XLOC_006716
TCONS_00012942 other upstream 503501 31579448 ~ 31579564 (-) True XLOC_006718