Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000001_10749174_10779222.mRNA |
| length | 2406 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 17 |
| gene id | CI01000001_10749174_10779222 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000001 |
| NCBI id | null |
| chromosome length | 13537560 |
| location | 10749174 ~ 10779454 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | description |
|---|---|
| K20690 | ARHGEF25; Rho guanine nucleotide exchange factor 25 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU21333 | lncRNA | upstream | 91903 | 10655387 ~ 10657271 (+) | True | G18998 |
| TU21384 | lncRNA | upstream | 94252 | 10654569 ~ 10654922 (+) | True | G19041 |
| TU21332 | lncRNA | upstream | 149923 | 10599026 ~ 10599251 (+) | True | G18997 |
| TU21343 | lncRNA | upstream | 150360 | 10598604 ~ 10598814 (+) | True | G19008 |
| TU21344 | lncRNA | upstream | 162880 | 10585956 ~ 10586294 (+) | True | G19009 |
| TU21423 | lncRNA | downstream | 34936 | 10814390 ~ 10815702 (+) | True | G19080 |
| TU21430 | lncRNA | downstream | 94528 | 10873982 ~ 10874233 (+) | True | G19087 |
| TU21431 | lncRNA | downstream | 95216 | 10874670 ~ 10874871 (+) | True | G19088 |
| TU21375 | lncRNA | downstream | 112983 | 10892437 ~ 10896905 (+) | True | G19034 |
| TU21493 | lncRNA | downstream | 146074 | 10925528 ~ 10986466 (+) | True | G19130 |
| CI01000001_10715529_10716091.mRNA | mRNA | upstream | 32264 | 10715114 ~ 10716910 (+) | True | CI01000001_10715529_10716091 |
| CI01000001_10694664_10713151.mRNA | mRNA | upstream | 34490 | 10694467 ~ 10714684 (+) | True | CI01000001_10694664_10713151 |
| CI01000001_10688354_10691353.mRNA | mRNA | upstream | 57765 | 10687862 ~ 10691409 (+) | True | CI01000001_10688354_10691353 |
| CI01000001_10604980_10633286.mRNA | mRNA | upstream | 115634 | 10603888 ~ 10633540 (+) | True | CI01000001_10604980_10633286 |
| CI01000001_10590766_10595793.mRNA | mRNA | upstream | 152936 | 10590436 ~ 10596238 (+) | True | CI01000001_10590766_10595793 |
| CI01000001_10807407_10818870.mRNA | mRNA | downstream | 27866 | 10807320 ~ 10820053 (+) | True | CI01000001_10807407_10818870 |
| CI01000001_10856786_10861403.mRNA | mRNA | downstream | 76506 | 10855960 ~ 10862138 (+) | True | CI01000001_10856786_10861403 |
| CI01000001_10968536_10981345.mRNA | mRNA | downstream | 188890 | 10968344 ~ 10981787 (+) | True | CI01000001_10968536_10981345 |
| CI01000001_10989337_10992917.mRNA | mRNA | downstream | 209883 | 10989337 ~ 10992978 (+) | True | CI01000001_10989337_10992917 |
| CI01000001_11019871_11028065.mRNA | mRNA | downstream | 240025 | 11019479 ~ 11028524 (+) | True | CI01000001_11019871_11028065 |
| TU21319 | other | upstream | 209328 | 10538472 ~ 10539846 (+) | True | CI01000001_10538498_10539667 |
| TU21318 | other | upstream | 209424 | 10538472 ~ 10539750 (+) | False | CI01000001_10538498_10539667 |
| TU21268 | other | upstream | 272785 | 10474984 ~ 10476389 (+) | True | G18937 |
| TU21193 | other | upstream | 352469 | 10393557 ~ 10395953 (+) | True | G18875 |
| TU21188 | other | upstream | 467805 | 10271146 ~ 10281369 (+) | True | G18872 |
| TU21382 | other | downstream | 71470 | 10850924 ~ 10853983 (+) | True | G19039 |
| TU21702 | other | downstream | 721740 | 11501194 ~ 11558673 (+) | True | G19314 |
| TU21803 | other | downstream | 901868 | 11681322 ~ 11681817 (+) | True | G19395 |
| TU22314 | other | downstream | 2733950 | 13513404 ~ 13513609 (+) | True | G19868 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00043132 | True | 1617 | mRNA | 0.51 | 13 | NC_007134.7 | 27912079 ~ 28007307 (+) |
| bowfin (Amia calva) | AMCG00008867 | True | 4752 | mRNA | 0.50 | 13 | CM030126.1 | 13517663 ~ 13534601 (+) |
