RNA id: TCONS_00012925


Basic Information

Item Value
RNA id TCONS_00012925
length 530
RNA type processed_transcript
GC content 0.53
exon number 4
gene id XLOC_006710
representative True

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 31193485 ~ 31205193 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CACAGAGACACAAGAAACCAAAGGGCTTTACCGTCTGCAAGAGCTGAATGCACGTCAGGTGACATGGGCTCCTCCAGGAAATACAATCAGGCTTCACCCTTCTGGgatcttcatcatcctcttcgTCATCATCATCCCAGCCGTTGTTGCTGGGCTGGGCAGGAGGCTCTGCTGGAGATGCTGCTTGAATGGCCTGCTGGTATGTTGGAGGTGTGTTCAGCAGTGATGGAGAAAGTGCAGGCACAGGAGGAGGAGCTTCAGAGGAGACTGCAGTGCTGCCGCTCGGGGGAGATGGAGCCGTAGTGCTGATGGTCAGAAGTAACAGTGAGGATAACTGGAGGAGGATCGGCTTGACAAAAATGAGAAGATGGACGTGGAGGTAGAGGTGGAGGAATTGATTTATCTGTTTCCAGCAGCTCACTCTCCTGGGTTTCCTCAGGTGAAGCTTCTTTTTTAAGCCCCATCTCTATCGCCCGCCTCAAGAGGAGCTCACTGAAATCTGGAGCCACAGACCTCGCTTGTAGGTCGAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000147293

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00012923 lncRNA downstream 26880 31160187 ~ 31166605 (-) False XLOC_006709
TCONS_00013844 lncRNA downstream 70647 31108526 ~ 31122838 (-) True XLOC_006707
TCONS_00013842 lncRNA downstream 70725 31102907 ~ 31122760 (-) False XLOC_006707
TCONS_00013843 lncRNA downstream 70725 31105176 ~ 31122760 (-) False XLOC_006707
TCONS_00013841 lncRNA downstream 101085 31089586 ~ 31092400 (-) True XLOC_006706
TCONS_00012935 lncRNA upstream 189518 31394711 ~ 31397088 (-) True XLOC_006715
TCONS_00013845 lncRNA upstream 594839 31800032 ~ 31800406 (-) True XLOC_006723
TCONS_00013846 lncRNA upstream 744964 31950157 ~ 31953845 (-) False XLOC_006727
TCONS_00013847 lncRNA upstream 744964 31950157 ~ 31955798 (-) True XLOC_006727
TCONS_00013489 lncRNA upstream 777868 31983061 ~ 31995753 (-) False XLOC_006728
TCONS_00012922 mRNA downstream 26024 31148237 ~ 31167461 (-) False XLOC_006709
TCONS_00012921 mRNA downstream 26024 31148237 ~ 31167461 (-) False XLOC_006709
TCONS_00012919 mRNA downstream 26922 31147937 ~ 31166563 (-) False XLOC_006709
TCONS_00012918 mRNA downstream 26926 31147518 ~ 31166559 (-) False XLOC_006709
TCONS_00012924 mRNA downstream 26941 31160233 ~ 31166544 (-) True XLOC_006709
TCONS_00012926 mRNA upstream 87507 31292700 ~ 31296358 (-) True XLOC_006711
TCONS_00012927 mRNA upstream 138133 31343326 ~ 31346392 (-) False XLOC_006712
TCONS_00012928 mRNA upstream 138133 31343326 ~ 31370184 (-) False XLOC_006712
TCONS_00012929 mRNA upstream 138323 31343516 ~ 31349284 (-) False XLOC_006712
TCONS_00012931 mRNA upstream 166343 31371536 ~ 31377299 (-) False XLOC_006713
TCONS_00012917 other downstream 66439 31126449 ~ 31127046 (-) True XLOC_006708
TCONS_00012916 other downstream 117538 31075833 ~ 31075947 (-) True XLOC_006705
TCONS_00012906 other downstream 321046 30855319 ~ 30872439 (-) True XLOC_006699
TCONS_00012900 other downstream 493026 30664819 ~ 30700459 (-) False XLOC_006695
TCONS_00012895 other downstream 561266 30632105 ~ 30632219 (-) True XLOC_006693
TCONS_00012930 other upstream 141402 31346595 ~ 31351772 (-) True XLOC_006712
TCONS_00012938 other upstream 219397 31424590 ~ 31440940 (-) False XLOC_006716
TCONS_00012942 other upstream 374255 31579448 ~ 31579564 (-) True XLOC_006718
TCONS_00012944 other upstream 431539 31636732 ~ 31647006 (-) False XLOC_006720
TCONS_00012947 other upstream 489738 31694931 ~ 31695047 (-) True XLOC_006722

Expression Profile

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