RNA id: TCONS_00012942


Basic Information

Item Value
RNA id TCONS_00012942
length 117
RNA type rRNA
GC content 0.48
exon number 1
gene id XLOC_006718
representative True

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 31579448 ~ 31579564 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TGCCACAGTCATATCAATCTGCAGGCCAAGACCgatactcactaaagctaagcagagctgagcctagtcagtacctgcatgggagaccacatgggaaaactataGGTGCTGTTAGAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000179552

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00012935 lncRNA downstream 182360 31394711 ~ 31397088 (-) True XLOC_006715
TCONS_00012923 lncRNA downstream 412843 31160187 ~ 31166605 (-) False XLOC_006709
TCONS_00013844 lncRNA downstream 456610 31108526 ~ 31122838 (-) True XLOC_006707
TCONS_00013842 lncRNA downstream 456688 31102907 ~ 31122760 (-) False XLOC_006707
TCONS_00013845 lncRNA upstream 220468 31800032 ~ 31800406 (-) True XLOC_006723
TCONS_00013846 lncRNA upstream 370593 31950157 ~ 31953845 (-) False XLOC_006727
TCONS_00013847 lncRNA upstream 370593 31950157 ~ 31955798 (-) True XLOC_006727
TCONS_00013489 lncRNA upstream 403497 31983061 ~ 31995753 (-) False XLOC_006728
TCONS_00012957 lncRNA upstream 403497 31983061 ~ 31995905 (-) False XLOC_006728
TCONS_00012941 mRNA downstream 35083 31536709 ~ 31544365 (-) True XLOC_006717
TCONS_00012940 mRNA downstream 109009 31424594 ~ 31470439 (-) True XLOC_006716
TCONS_00012939 mRNA downstream 126932 31424594 ~ 31452516 (-) False XLOC_006716
TCONS_00012937 mRNA downstream 138406 31424587 ~ 31441042 (-) False XLOC_006716
TCONS_00012936 mRNA downstream 144311 31424586 ~ 31435137 (-) False XLOC_006716
TCONS_00012943 mRNA upstream 40397 31619961 ~ 31622195 (-) True XLOC_006719
TCONS_00012945 mRNA upstream 57168 31636732 ~ 31647323 (-) True XLOC_006720
TCONS_00012946 mRNA upstream 102424 31681988 ~ 31687925 (-) True XLOC_006721
TCONS_00012948 mRNA upstream 226260 31805824 ~ 31812394 (-) False XLOC_006724
TCONS_00012949 mRNA upstream 230942 31810506 ~ 31829786 (-) True XLOC_006724
TCONS_00012938 other downstream 138508 31424590 ~ 31440940 (-) False XLOC_006716
TCONS_00012930 other downstream 227676 31346595 ~ 31351772 (-) True XLOC_006712
TCONS_00012925 other downstream 374255 31193485 ~ 31205193 (-) True XLOC_006710
TCONS_00012917 other downstream 452402 31126449 ~ 31127046 (-) True XLOC_006708
TCONS_00012916 other downstream 503501 31075833 ~ 31075947 (-) True XLOC_006705
TCONS_00012944 other upstream 57168 31636732 ~ 31647006 (-) False XLOC_006720
TCONS_00012947 other upstream 115367 31694931 ~ 31695047 (-) True XLOC_006722
TCONS_00012961 other upstream 1008988 32588552 ~ 32595220 (-) False XLOC_006734
TCONS_00013011 other upstream 2032139 33611703 ~ 33639021 (-) False XLOC_006759
TCONS_00013017 other upstream 2080144 33659708 ~ 33662353 (-) False XLOC_006761