RNA id: TU21362


Basic Information

Item Value
RNA id TU21362
length 215
lncRNA type inter_gene
GC content 0.27
exon number 1
gene id G19026
representative True

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 10537802 ~ 10538016 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATTATGGTTTTCTATTTTAATATACTTTAAAATATAATTTATTTCTGTGATGCAAAGCTGAATTTTCAGCATCATTACTCCAGTCTTCAGTGTCACATGATCTTTCAGAAATCATTGTAATATGCTGATTTATTATCAATGTTGGAAACAGTTGTGCTGCTTAATATTATTTTATAACCTGTGATACTTTTTCAGGATTCTTTGATGAATAAAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU21346 lncRNA upstream 36987 10498633 ~ 10500815 (+) True G19011
TU21264 lncRNA upstream 50241 10485148 ~ 10487561 (+) True G18933
TU21256 lncRNA upstream 97431 10437326 ~ 10440371 (+) True G18929
TU21303 lncRNA upstream 100929 10436653 ~ 10436873 (+) True G18969
TU21302 lncRNA upstream 101807 10435770 ~ 10435995 (+) True G18968
TU21365 lncRNA downstream 15328 10553344 ~ 10553661 (+) True G19029
TU21366 lncRNA downstream 15673 10553689 ~ 10553969 (+) True G19030
TU21344 lncRNA downstream 47940 10585956 ~ 10586294 (+) True G19009
TU21343 lncRNA downstream 60588 10598604 ~ 10598814 (+) True G19008
TU21332 lncRNA downstream 61010 10599026 ~ 10599251 (+) True G18997
CI01000001_10525795_10530510.mRNA mRNA upstream 7259 10523262 ~ 10530543 (+) True CI01000001_10525795_10530510
CI01000001_10420931_10426716.mRNA mRNA upstream 110655 10420318 ~ 10427147 (+) True CI01000001_10420931_10426716
CI01000001_10395420_10396473.mRNA mRNA upstream 141329 10394851 ~ 10396473 (+) False CI01000001_10395420_10396473
CI01000001_10328133_10329110.mRNA mRNA upstream 208692 10328040 ~ 10329110 (+) True CI01000001_10328133_10329110
CI01000001_10321783_10325266.mRNA mRNA upstream 212497 10321647 ~ 10325305 (+) True CI01000001_10321783_10325266
CI01000001_10538498_10539667.mRNA mRNA downstream 372 10538388 ~ 10539702 (+) False CI01000001_10538498_10539667
CI01000001_10573770_10582123.mRNA mRNA downstream 35754 10573770 ~ 10582238 (+) True CI01000001_10573770_10582123
CI01000001_10582439_10582802.mRNA mRNA downstream 44362 10582378 ~ 10582821 (+) True CI01000001_10582439_10582802
CI01000001_10590766_10595793.mRNA mRNA downstream 52420 10590436 ~ 10596238 (+) True CI01000001_10590766_10595793
CI01000001_10604980_10633286.mRNA mRNA downstream 65872 10603888 ~ 10633540 (+) True CI01000001_10604980_10633286
TU21268 other upstream 61413 10474984 ~ 10476389 (+) True G18937
TU21193 other upstream 141097 10393557 ~ 10395953 (+) True G18875
TU21188 other upstream 256433 10271146 ~ 10281369 (+) True G18872
TU21190 other upstream 277088 10257112 ~ 10260714 (+) True G18873
TU21219 other upstream 296310 10239900 ~ 10241492 (+) True G18896
TU21318 other downstream 456 10538472 ~ 10539750 (+) False CI01000001_10538498_10539667
TU21319 other downstream 456 10538472 ~ 10539846 (+) True CI01000001_10538498_10539667
TU21382 other downstream 312908 10850924 ~ 10853983 (+) True G19039
TU21702 other downstream 963178 11501194 ~ 11558673 (+) True G19314
TU21803 other downstream 1143306 11681322 ~ 11681817 (+) True G19395

Expression Profile